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Merge pull request #10 from hcnv/SV_format
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Update CNV-file-formats.md
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mbaudis authored Dec 1, 2023
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### VCF

VCF 4.4 is the most appropriate VCF format to store Structural variants including copy number variants
* VCF specification [v4.4 PDF](https://samtools.github.io/hts-specs/VCFv4.4.pdf)
* VCF specification [v4.3 PDF](https://samtools.github.io/hts-specs/VCFv4.3.pdf)
* VCF specification [v4.2 PDF](https://samtools.github.io/hts-specs/VCFv4.2.pdf)


### BED files and other columnar segment files

* BED file documentation at [UCSC genome browser](https://genome.ucsc.edu/FAQ/FAQformat.html#format1)
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last update 2023-07-07 by @mbaudis
last update 2023-07-07 by @tcezard

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