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Fix notebook execution #1200

Fix notebook execution

Fix notebook execution #1200

Workflow file for this run

name: CI
on:
push:
branches:
- main
- dev
pull_request:
branches:
- main
- dev
# Allows you to run this workflow manually from the Actions tab
workflow_dispatch:
jobs:
Linting:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: ['3.8', '3.9', '3.10', '3.11']
steps:
- uses: actions/checkout@v2
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v2
with:
python-version: ${{ matrix.python-version }}
- name: Poetry cache
uses: actions/cache@v3
with:
path: ~/.cache/pypoetry
key: poetry-cache-${{ runner.os }}-${{ steps.setup_python.outputs.python-version }}-${{ env.POETRY_VERSION }}
- name: Install Poetry
uses: snok/install-poetry@v1
- name: Install Dependencies
# TODO: fix errors so that we can run `make dev` instead
run: |
make full
- name: Lint with isort, black, docformatter, flake8
run: |
make lint
Typing:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: ['3.8', '3.9', '3.10', '3.11']
pydantic-version: ['1.10.9', '2.4.2']
openai-version: ['0.28.1', '1.2.4']
steps:
- uses: actions/checkout@v2
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v2
with:
python-version: ${{ matrix.python-version }}
- name: Poetry cache
uses: actions/cache@v3
with:
path: ~/.cache/pypoetry
key: poetry-cache-${{ runner.os }}-${{ steps.setup_python.outputs.python-version }}-${{ env.POETRY_VERSION }}-${{ matrix.pydantic-version }}
- name: Install Poetry
uses: snok/install-poetry@v1
- name: Install Dependencies
# TODO: fix errors so that we can run `make dev` instead
run: |
make full
poetry run pip install pydantic==${{ matrix.pydantic-version }}
poetry run pip install openai==${{ matrix.openai-version }}
- if: matrix.pydantic-version == '2.4.2' && matrix.openai-version == '0.28.1'
name: Static analysis with pyright (ignoring pydantic v1 and openai v1)
run: |
make type-pydantic-v2-openai-v0
- if: matrix.pydantic-version == '1.10.9' && matrix.openai-version == '0.28.1'
name: Static analysis with mypy (ignoring pydantic v2 and openai v1)
run: |
make type-pydantic-v1-openai-v0
- if: matrix.pydantic-version == '2.4.2' && matrix.openai-version == '1.2.4'
name: Static analysis with pyright (ignoring pydantic v1 and openai v0)
run: |
make type-pydantic-v2-openai-v1
- if: matrix.pydantic-version == '1.10.9' && matrix.openai-version == '1.2.4'
name: Static analysis with mypy (ignoring pydantic v2 and openai v0)
run: |
make type-pydantic-v1-openai-v1
Pytests:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: ['3.8', '3.9', '3.10', '3.11']
# TODO: fix errors so that we can run both `make dev` and `make full`
# dependencies: ['dev', 'full']
dependencies: ['full']
pydantic-version: ['1.10.9', '2.4.2']
openai-version: ['0.28.1', '1.2.4']
steps:
- uses: actions/checkout@v2
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v2
with:
python-version: ${{ matrix.python-version }}
- name: Poetry cache
uses: actions/cache@v3
with:
path: ~/.cache/pypoetry
key: poetry-cache-${{ runner.os }}-${{ steps.setup_python.outputs.python-version }}-${{ env.POETRY_VERSION }}-${{ matrix.pydantic-version }}-${{ matrix.openai-version }}
- name: Install Poetry
uses: snok/install-poetry@v1
- name: Install Dependencies
run: |
make ${{ matrix.dependencies }}
poetry run pip install pydantic==${{ matrix.pydantic-version }}
poetry run pip install openai==${{ matrix.openai-version }}
- name: Run Pytests
run: |
make test-cov
- name: Upload to codecov.io
uses: codecov/codecov-action@v3
with:
token: ${{ secrets.CODECOV_TOKEN }}
file: ./coverage.xml
flags: unittests
name: codecov-umbrella
fail_ci_if_error: true
Notebooks:
runs-on: ubuntu-latest
if: ${{ always() && contains(join(needs.*.result, ','), 'success') }}
needs: [Linting, Typing, Pytests]
env:
COHERE_API_KEY: ${{ secrets.COHERE_API_KEY }}
OPENAI_API_KEY: ${{ secrets.OPENAI_API_KEY }}
steps:
- name: Checkout repository
uses: actions/checkout@v2
- name: Set up Python
uses: actions/setup-python@v2
with:
python-version: 3.11.x
- name: Poetry cache
uses: actions/cache@v3
with:
path: ~/.cache/pypoetry
key: poetry-cache-${{ runner.os }}-${{ steps.setup_python.outputs.python-version }}-${{ env.POETRY_VERSION }}
- name: Install Poetry
uses: snok/install-poetry@v1
with:
virtualenvs-create: true
virtualenvs-in-project: true
installer-parallel: true
- name: Install dependencies
run: |
make full;
poetry add openai==0.28.1 jupyter nbconvert cohere;
# pip install openai==0.28.1 jupyter nbconvert;
# pip install .;
- name: Check for pypdfium2
run: poetry run pip show pypdfium2
- name: Execute notebooks and check for errors
run: |
cd docs/examples
for notebook in $(ls *.ipynb); do
if [ "$notebook" != "valid_chess_moves.ipynb" ] && [ "$notebook" != "translation_with_quality_check.ipynb" ]; then
poetry run jupyter nbconvert --to notebook --execute "$notebook"
if [ $? -ne 0 ]; then
echo "Error found in $notebook"
exit 1
fi
fi
done