updated online manual and matlab toolbox

gnu-octave · Apr 28, 2024 · 2b2c452 · 2b2c452
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diff --git a/docs/copying.html b/docs/copying.html
@@ -3,7 +3,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
   <head>
   <meta http-equiv="content-type" content="text/html; charset=utf-8" />
-  <meta name="date" content="2024-04-27"/>
+  <meta name="date" content="2024-04-28"/>
   <meta name="generator" content="generate_html 0.3.3" />
   <meta name="author" content="Andrew Penn" />
   <meta name="description" content="A package for statistical analysis using resampling methods." />

diff --git a/docs/description.json b/docs/description.json
@@ -1,7 +1,7 @@
 {
   "generator": "generate_html",
   "generator_version": "0.3.3",
-  "date_generated": "2024-04-27",
+  "date_generated": "2024-04-28",
   "package": 
   {
     "name": "statistics-resampling",

diff --git a/docs/function/boot.html b/docs/function/boot.html
@@ -3,7 +3,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
   <head>
   <meta http-equiv="content-type" content="text/html; charset=utf-8" />
-  <meta name="date" content="2024-04-27"/>
+  <meta name="date" content="2024-04-28"/>
   <meta name="generator" content="generate_html 0.3.3" />
   <meta name="author" content="Andrew Penn" />
   <meta name="description" content="A package for statistical analysis using resampling methods." />

diff --git a/docs/function/boot1way.html b/docs/function/boot1way.html
@@ -3,7 +3,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
   <head>
   <meta http-equiv="content-type" content="text/html; charset=utf-8" />
-  <meta name="date" content="2024-04-27"/>
+  <meta name="date" content="2024-04-28"/>
   <meta name="generator" content="generate_html 0.3.3" />
   <meta name="author" content="Andrew Penn" />
   <meta name="description" content="A package for statistical analysis using resampling methods." />
@@ -529,7 +529,7 @@ <h3><a name="7">Demonstration 7</a></h3>
 -----------------------------------------------------------------------------
 | Comparison |     Test # |      Ref # | Difference |          t |        p |
 |------------|------------|------------|------------|------------|----------|
-|          1 |          2 |          1 |    +0.6008 |      +1.41 |     .115 |
+|          1 |          2 |          1 |    +0.2840 |      +0.58 |     .557 |
 
 -----------------------------------------------------------------------------
 |    GROUP # |                                       GROUP label |        N |
@@ -574,7 +574,7 @@ <h3><a name="8">Demonstration 8</a></h3>
 -----------------------------------------------------------------------------
 | Comparison |     Test # |      Ref # | Difference |          t |        p |
 |------------|------------|------------|------------|------------|----------|
-|          1 |          2 |          1 |   +0.08385 |      +0.16 |     .822 |
+|          1 |          2 |          1 |    +0.1328 |      +0.17 |     .765 |
 
 -----------------------------------------------------------------------------
 |    GROUP # |                                       GROUP label |        N |

diff --git a/docs/function/bootbayes.html b/docs/function/bootbayes.html
@@ -3,7 +3,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
   <head>
   <meta http-equiv="content-type" content="text/html; charset=utf-8" />
-  <meta name="date" content="2024-04-27"/>
+  <meta name="date" content="2024-04-28"/>
   <meta name="generator" content="generate_html 0.3.3" />
   <meta name="author" content="Andrew Penn" />
   <meta name="description" content="A package for statistical analysis using resampling methods." />
@@ -191,7 +191,7 @@ <h3><a name="1">Demonstration 1</a></h3>
 
 Posterior Statistics: 
  original     bias         median       stdev       CI_lower      CI_upper
- +184.5       -0.02126     +184.5       1.318       +182.0        +187.3</pre>
+ +184.5       -0.02210     +184.5       1.240       +182.1        +186.9</pre>
 </div>
 
 <h3><a name="2">Demonstration 2</a></h3>
@@ -228,8 +228,8 @@ <h3><a name="2">Demonstration 2</a></h3>
 
 Posterior Statistics: 
  original     bias         median       stdev       CI_lower      CI_upper
- +175.5       +0.01138     +175.5       2.337       +171.2        +180.3    
- +0.1904      -0.0004370   +0.1910      0.07697     +0.04999      +0.3518</pre>
+ +175.5       +0.03532     +175.5       2.384       +171.1        +180.3    
+ +0.1904      -0.001074    +0.1909      0.07912     +0.04160      +0.3442</pre>
 </div>
 
 <p>Package: <a href="../index.html">statistics-resampling</a></p>

diff --git a/docs/function/bootcdf.html b/docs/function/bootcdf.html
@@ -3,7 +3,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
   <head>
   <meta http-equiv="content-type" content="text/html; charset=utf-8" />
-  <meta name="date" content="2024-04-27"/>
+  <meta name="date" content="2024-04-28"/>
   <meta name="generator" content="generate_html 0.3.3" />
   <meta name="author" content="Andrew Penn" />
   <meta name="description" content="A package for statistical analysis using resampling methods." />

diff --git a/docs/function/bootci.html b/docs/function/bootci.html
@@ -3,7 +3,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
   <head>
   <meta http-equiv="content-type" content="text/html; charset=utf-8" />
-  <meta name="date" content="2024-04-27"/>
+  <meta name="date" content="2024-04-28"/>
   <meta name="generator" content="generate_html 0.3.3" />
   <meta name="author" content="Andrew Penn" />
   <meta name="description" content="A package for statistical analysis using resampling methods." />
@@ -20,8 +20,8 @@
 <div id="doccontent">
 
 <h2>bootci</h2>
-<pre> Bootstrap confidence intervals: Performs bootstrap and calculates confidence
- intervals from the resulting bootstrap statistics.
+<pre> Advanced bootstrap confidence intervals: Performs bootstrap and calculates
+ various types of confidence intervals from the resulting bootstrap statistics. 
 
  -- Function File: CI = bootci (NBOOT, BOOTFUN, D)
  -- Function File: CI = bootci (NBOOT, BOOTFUN, D1,...,DN)
@@ -468,8 +468,8 @@ <h3><a name="10">Demonstration 10</a></h3>
 <p>Produces the following output</p>
 <pre class="example">ci =
 
-     -0.75373     -0.48922
-      0.27477       1.0691</pre>
+     0.058644     -0.26038
+      0.81295      0.60855</pre>
 </div>
 
 <h3><a name="11">Demonstration 11</a></h3>

diff --git a/docs/function/bootclust.html b/docs/function/bootclust.html
@@ -3,7 +3,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
   <head>
   <meta http-equiv="content-type" content="text/html; charset=utf-8" />
-  <meta name="date" content="2024-04-27"/>
+  <meta name="date" content="2024-04-28"/>
   <meta name="generator" content="generate_html 0.3.3" />
   <meta name="author" content="Andrew Penn" />
   <meta name="description" content="A package for statistical analysis using resampling methods." />
@@ -376,8 +376,8 @@ <h3><a name="7">Demonstration 7</a></h3>
 
 Bootstrap Statistics: 
  original     bias         std_error    CI_lower     CI_upper  
- -0.06488     +0.03383     +0.2636      -0.4848      +0.3599    
- -0.002379    -0.02298     +0.2764      -0.4656      +0.4233</pre>
+ -0.4181      -0.03727     +0.2810      -0.8581      +0.06276   
+ -0.1687      +0.08519     +0.3837      -0.7141      +0.4170</pre>
 </div>
 
 <h3><a name="8">Demonstration 8</a></h3>
@@ -406,8 +406,8 @@ <h3><a name="8">Demonstration 8</a></h3>
 
 Bootstrap Statistics: 
  original     bias         std_error    CI_lower     CI_upper  
- -0.01519     +0.01195     +0.2399      -0.3293      +0.5024    
- -0.2555      +0.03056     +0.2517      -0.7191      +0.1205</pre>
+ -0.4050      -0.03514     +0.3065      -0.8754      +0.1245    
+ +0.1612      -0.02179     +0.2439      -0.2628      +0.5464</pre>
 </div>
 
 <h3><a name="9">Demonstration 9</a></h3>

diff --git a/docs/function/bootint.html b/docs/function/bootint.html
@@ -3,7 +3,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
   <head>
   <meta http-equiv="content-type" content="text/html; charset=utf-8" />
-  <meta name="date" content="2024-04-27"/>
+  <meta name="date" content="2024-04-28"/>
   <meta name="generator" content="generate_html 0.3.3" />
   <meta name="author" content="Andrew Penn" />
   <meta name="description" content="A package for statistical analysis using resampling methods." />
@@ -20,7 +20,7 @@
 <div id="doccontent">
 
 <h2>bootint</h2>
-<pre> Computes percentile confidence interval(s) from a vector (or row-major
+<pre> Computes simple percentile confidence interval(s) from a vector (or row-major
  matrix) of bootstrap statistics.
 
  -- Function File: CI = bootint (Y)

diff --git a/docs/function/bootknife.html b/docs/function/bootknife.html
@@ -3,7 +3,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
   <head>
   <meta http-equiv="content-type" content="text/html; charset=utf-8" />
-  <meta name="date" content="2024-04-27"/>
+  <meta name="date" content="2024-04-28"/>
   <meta name="generator" content="generate_html 0.3.3" />
   <meta name="author" content="Andrew Penn" />
   <meta name="description" content="A package for statistical analysis using resampling methods." />
@@ -442,8 +442,8 @@ <h3><a name="8">Demonstration 8</a></h3>
 
 Bootstrap Statistics: 
  original     bias         std_error    CI_lower     CI_upper  
- -0.004078    -0.01027     +0.3222      -0.4566      +0.6178    
- +0.06713     -0.002710    +0.3026      -0.4637      +0.5281</pre>
+ +0.1665      +0.003180    +0.3301      -0.3348      +0.7593    
+ +0.1038      +0.04636     +0.3270      -0.2973      +0.6811</pre>
 </div>
 
 <h3><a name="9">Demonstration 9</a></h3>

diff --git a/docs/function/bootlm.html b/docs/function/bootlm.html
@@ -3,7 +3,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
   <head>
   <meta http-equiv="content-type" content="text/html; charset=utf-8" />
-  <meta name="date" content="2024-04-27"/>
+  <meta name="date" content="2024-04-28"/>
   <meta name="generator" content="generate_html 0.3.3" />
   <meta name="author" content="Andrew Penn" />
   <meta name="description" content="A package for statistical analysis using resampling methods." />

diff --git a/docs/function/bootmode.html b/docs/function/bootmode.html
@@ -3,7 +3,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
   <head>
   <meta http-equiv="content-type" content="text/html; charset=utf-8" />
-  <meta name="date" content="2024-04-27"/>
+  <meta name="date" content="2024-04-28"/>
   <meta name="generator" content="generate_html 0.3.3" />
   <meta name="author" content="Andrew Penn" />
   <meta name="description" content="A package for statistical analysis using resampling methods." />
@@ -149,9 +149,9 @@ <h3><a name="1">Demonstration 1</a></h3>
 <p>Produces the following output</p>
 <pre class="example">ans = Summary of results:
 
-ans = H1 is 1 with p = 0.0005 so reject the null hypothesisthat there is 1 mode
+ans = H1 is 1 with p = 0 so reject the null hypothesisthat there is 1 mode
 
-ans = H2 is 0 with p = 0.332 so accept the null hypothesis that there are 2 modes</pre>
+ans = H2 is 0 with p = 0.314 so accept the null hypothesis that there are 2 modes</pre>
 </div>
 
 <p>Package: <a href="../index.html">statistics-resampling</a></p>

diff --git a/docs/function/bootstrp.html b/docs/function/bootstrp.html
@@ -3,7 +3,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
   <head>
   <meta http-equiv="content-type" content="text/html; charset=utf-8" />
-  <meta name="date" content="2024-04-27"/>
+  <meta name="date" content="2024-04-28"/>
   <meta name="generator" content="generate_html 0.3.3" />
   <meta name="author" content="Andrew Penn" />
   <meta name="description" content="A package for statistical analysis using resampling methods." />

diff --git a/docs/function/bootwild.html b/docs/function/bootwild.html
@@ -3,7 +3,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
   <head>
   <meta http-equiv="content-type" content="text/html; charset=utf-8" />
-  <meta name="date" content="2024-04-27"/>
+  <meta name="date" content="2024-04-28"/>
   <meta name="generator" content="generate_html 0.3.3" />
   <meta name="author" content="Andrew Penn" />
   <meta name="description" content="A package for statistical analysis using resampling methods." />
@@ -180,7 +180,7 @@ <h3><a name="1">Demonstration 1</a></h3>
 
 Test Statistics: 
  original     std_err      CI_lower     CI_upper     t-stat      p-val     FPR
- +184.5       +1.243       +181.5       +187.5       +148.       <.001    .010</pre>
+ +184.5       +1.243       +181.6       +187.4       +148.       <.001    .010</pre>
 </div>
 
 <h3><a name="2">Demonstration 2</a></h3>
@@ -218,8 +218,8 @@ <h3><a name="2">Demonstration 2</a></h3>
 
 Test Statistics: 
  original     std_err      CI_lower     CI_upper     t-stat      p-val     FPR
- +175.5       +2.502       +169.7       +181.4       +70.1       <.001    .010
- +0.1904      +0.08261     +0.007925    +0.3729      +2.31        .045    .274</pre>
+ +175.5       +2.502       +169.8       +181.2       +70.1       <.001    .010
+ +0.1904      +0.08261     +0.003534    +0.3773      +2.31        .047    .280</pre>
 </div>
 
 <p>Package: <a href="../index.html">statistics-resampling</a></p>

diff --git a/docs/function/cor.html b/docs/function/cor.html
@@ -3,7 +3,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
   <head>
   <meta http-equiv="content-type" content="text/html; charset=utf-8" />
-  <meta name="date" content="2024-04-27"/>
+  <meta name="date" content="2024-04-28"/>
   <meta name="generator" content="generate_html 0.3.3" />
   <meta name="author" content="Andrew Penn" />
   <meta name="description" content="A package for statistical analysis using resampling methods." />
@@ -20,8 +20,8 @@
 <div id="doccontent">
 
 <h2>cor</h2>
-<pre> Vectorized function for computing Pearson's correlation coefficient (RHO)
- between the columns in two matrices and/or column vectors.
+<pre> Vectorized function for computating Pearson's correlation coefficient (RHO)
+ between each of the respective columns in two data vectors or matrices.
 
  -- Function File: RHO = cor (X, Y)
  -- Function File: R2  = cor (X, Y, 'squared')

diff --git a/docs/function/credint.html b/docs/function/credint.html
@@ -3,7 +3,7 @@
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   <head>
   <meta http-equiv="content-type" content="text/html; charset=utf-8" />
-  <meta name="date" content="2024-04-27"/>
+  <meta name="date" content="2024-04-28"/>
   <meta name="generator" content="generate_html 0.3.3" />
   <meta name="author" content="Andrew Penn" />
   <meta name="description" content="A package for statistical analysis using resampling methods." />

diff --git a/docs/function/deffcalc.html b/docs/function/deffcalc.html
@@ -3,7 +3,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
   <head>
   <meta http-equiv="content-type" content="text/html; charset=utf-8" />
-  <meta name="date" content="2024-04-27"/>
+  <meta name="date" content="2024-04-28"/>
   <meta name="generator" content="generate_html 0.3.3" />
   <meta name="author" content="Andrew Penn" />
   <meta name="description" content="A package for statistical analysis using resampling methods." />

diff --git a/docs/function/images/boot1way_701.png b/docs/function/images/boot1way_701.png
diff --git a/docs/function/images/boot1way_801.png b/docs/function/images/boot1way_801.png
diff --git a/docs/function/randtest.html b/docs/function/randtest.html
@@ -3,7 +3,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
   <head>
   <meta http-equiv="content-type" content="text/html; charset=utf-8" />
-  <meta name="date" content="2024-04-27"/>
+  <meta name="date" content="2024-04-28"/>
   <meta name="generator" content="generate_html 0.3.3" />
   <meta name="author" content="Andrew Penn" />
   <meta name="description" content="A package for statistical analysis using resampling methods." />
@@ -146,8 +146,8 @@ <h3><a name="2">Demonstration 2</a></h3>
 <p>Produces the following output</p>
 <pre class="example">pval =
 
-      0.54587
-   0.00054459
+      0.53148
+   0.00049014
 
 stat =
 
@@ -173,7 +173,7 @@ <h3><a name="3">Demonstration 3</a></h3>
  % of standardized x and y values.
  [pval, stat] = randtest (X, Y, 5000, @cor)</pre>
 <p>Produces the following output</p>
-<pre class="example">pval = 0.0008052
+<pre class="example">pval = 0.0002
 stat = 0.72317</pre>
 </div>
 

diff --git a/docs/function/randtest1.html b/docs/function/randtest1.html
@@ -3,7 +3,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
   <head>
   <meta http-equiv="content-type" content="text/html; charset=utf-8" />
-  <meta name="date" content="2024-04-27"/>
+  <meta name="date" content="2024-04-28"/>
   <meta name="generator" content="generate_html 0.3.3" />
   <meta name="author" content="Andrew Penn" />
   <meta name="description" content="A package for statistical analysis using resampling methods." />

diff --git a/docs/function/randtest2.html b/docs/function/randtest2.html
@@ -3,7 +3,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
   <head>
   <meta http-equiv="content-type" content="text/html; charset=utf-8" />
-  <meta name="date" content="2024-04-27"/>
+  <meta name="date" content="2024-04-28"/>
   <meta name="generator" content="generate_html 0.3.3" />
   <meta name="author" content="Andrew Penn" />
   <meta name="description" content="A package for statistical analysis using resampling methods." />
@@ -162,9 +162,9 @@ <h3><a name="1">Demonstration 1</a></h3>
                            @(A, B) log (var (A) ./ var (B)))
 </pre>
 <p>Produces the following output</p>
-<pre class="example">pval = 0.3484
-pval = 0.2922
-pval = 0.32362</pre>
+<pre class="example">pval = 0.3668
+pval = 0.2698
+pval = 0.30905</pre>
 </div>
 
 <h3><a name="2">Demonstration 2</a></h3>

diff --git a/docs/function/sampszcalc.html b/docs/function/sampszcalc.html
@@ -3,7 +3,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
   <head>
   <meta http-equiv="content-type" content="text/html; charset=utf-8" />
-  <meta name="date" content="2024-04-27"/>
+  <meta name="date" content="2024-04-28"/>
   <meta name="generator" content="generate_html 0.3.3" />
   <meta name="author" content="Andrew Penn" />
   <meta name="description" content="A package for statistical analysis using resampling methods." />

diff --git a/docs/function/smoothmad.html b/docs/function/smoothmad.html
@@ -3,7 +3,7 @@
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   <head>
   <meta http-equiv="content-type" content="text/html; charset=utf-8" />
-  <meta name="date" content="2024-04-27"/>
+  <meta name="date" content="2024-04-28"/>
   <meta name="generator" content="generate_html 0.3.3" />
   <meta name="author" content="Andrew Penn" />
   <meta name="description" content="A package for statistical analysis using resampling methods." />

diff --git a/docs/function/smoothmedian.html b/docs/function/smoothmedian.html
@@ -3,7 +3,7 @@
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   <head>
   <meta http-equiv="content-type" content="text/html; charset=utf-8" />
-  <meta name="date" content="2024-04-27"/>
+  <meta name="date" content="2024-04-28"/>
   <meta name="generator" content="generate_html 0.3.3" />
   <meta name="author" content="Andrew Penn" />
   <meta name="description" content="A package for statistical analysis using resampling methods." />