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added docs
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cmungall committed Jul 14, 2015
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1 change: 1 addition & 0 deletions CONTRIBUTING.md
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See the [Noctua contributors guide](https://github.com/geneontology/noctua/blob/master/CONTRIBUTING.md)
2 changes: 1 addition & 1 deletion README.md
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Expand Up @@ -2,4 +2,4 @@ A server for [Noctua](https://github.com/geneontology/noctua/)

To build and launch a server, see [INSTRUCTIONS.md](INSTRUCTIONS.md)


For specifications, see [specs/](specs)
3 changes: 3 additions & 0 deletions specs/README.md
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This directory contains specifications for the Noctua-Minerva modeling system

* [owl-model](owl-model.md)
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## Noctua Models in OWL

A Noctua Model (NM) is a collection of OWL axioms that fit within a
defined subset of OWL, and follow a set of conventions for describing evidential

### Core Axiom Types

* ClassAssertion (rdf:type)
* ObjectPropertyAssertion (triples)

### Class Constructs

* SomeValuesFrom
* IntersectionOf
* UnionOf

### Axiom Annotations

## LEGO Models

A LEGO Model (LM) is a NM that consists of individuals instantiating
GO activity classes, making use of a set of LEGO relations, in addition to classes in other ontologies. The
core information in a LM is conveyed by these acitivity individuals.




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