Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Create gorule-0000064.md #2275

Merged
merged 2 commits into from
Mar 27, 2024
Merged
Show file tree
Hide file tree
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
13 changes: 13 additions & 0 deletions metadata/rules/README.md
Original file line number Diff line number Diff line change
Expand Up @@ -65,6 +65,7 @@ For more details for GOC members on how to create rules, see [SOP.md](SOP.md)
* <a href="#gorule0000061">GORULE:0000061 Allowed gene product to term relations (gp2term)</a>
* <a href="#gorule0000062">GORULE:0000062 Infer annotations on molecular function via has_part</a>
* <a href="#gorule0000063">GORULE:0000063 Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)</a>
* <a href="#gorule0000064">GORULE:0000064 TreeGrafter IEAs should be filtered for GO reference species</a>



Expand Down Expand Up @@ -1068,3 +1069,15 @@ For any annotation to a molecular function MF-X, infer annotation to all MFs tha


See also GO-RULE:0000038 (proposed) for a check of the values in the 'with' field.

<a name="gorule0000064"/>

## TreeGrafter IEAs should be filtered for GO reference species

* id: [GORULE:0000064](https://github.com/geneontology/go-site/blob/master/metadata/rules/gorule-0000064.md)
* status: approved



If an annotation is an IEA to GO_REF:0000118 and the taxon is not in the GO reference species list
(i.e 143 Panther species), then filter out.
12 changes: 12 additions & 0 deletions metadata/rules/gorule-0000064.md
Original file line number Diff line number Diff line change
@@ -0,0 +1,12 @@
---
layout: rule
id: GORULE:0000064
title: "TreeGrafter IEAs should be filtered for GO reference species"
type: filter
fail_mode: hard
status: approved
contact: "[email protected]"
---

If an annotation is an IEA to GO_REF:0000118 and the taxon is not in the GO reference species list
(i.e 143 Panther species), then filter out.