Update gorules_test_errors.gaf

geneontology · Aug 30, 2024 · 8d7dff4 · 8d7dff4
1 parent e9c1d43
commit 8d7dff4
Showing 1 changed file with 3 additions and 1 deletion.
diff --git a/docs/gorules_test_errors.gaf b/docs/gorules_test_errors.gaf
@@ -22,7 +22,7 @@ PomBase	SPAC25B8.17	ypf1	is_active_in	GO:0005634	GO_REF:0000024	ISO	SGD:S0000015
 ! FAILS GORULE:0000001 - TEST 5 - Bad evidence code															
 PomBase	SPAC25B8.17	ypf1	is_active_in	GO:0005634	GO_REF:0000024	MADEUP	SGD:S000001583	C	GORULE_TEST:0000001-5 intramembrane aspartyl protease of the perinuclear ER membrane Ypf1 (predicted)	ppp81	protein	taxon:4896	20150305	PomBase	part_of(X:1)
 ! FAILS GORULE:0000001 - TEST 6 - Bad date, but fixable														
-PomBase	SPAC25B8.17	ypf1	is_active_in	GO:0005634	GO_REF:0000024	ISO	SGD:S000001583	C	GORULE_TEST:0000001-6 intramembrane aspartyl protease of the perinuclear ER membrane Ypf1 (predicted)	ppp81	protein	taxon:4896	3/5/15	PomBase	part_of(X:1)
+PomBase	SPAC25B8.17	ypf1	is_active_in	GO:0005634	GO_REF:0000024	ISO	SGD:S000001583	C	GORULE_TEST:0000001-6 intramembrane aspartyl protease of the perinuclear ER membrane Ypf1 (predicted)	ppp81	protein	taxon:4896	3/5/15	PomBase
 ! FAILS GORULE:0000001 - TEST 7 - Bad date, unparsable															
 PomBase	SPAC25B8.17	ypf1	is_active_in	GO:0005634	GO_REF:0000024	ISO	SGD:S000001583	C	GORULE_TEST:0000001-7 intramembrane aspartyl protease of the perinuclear ER membrane Ypf1 (predicted)	ppp81	protein	taxon:4896	TODAY	PomBase	part_of(X:1)
 ! FAILS GORULE:0000001 - TEST 8 - invalid taxon 0															
@@ -187,6 +187,8 @@ FB	FBgn0024811	Crk	involved_in	GO:0048010	FB:FBrf0180198|PMID:1545721X	IMP		P	GO
 UniProtKB	Q6UW15	REG3G	involved_in	GO:0006401	PMID:16931762	IDA		P	GORULE_TEST:0000027-18 Regenerating islet-derived protein 3-gamma	REG3G|PAP1B|UNQ429/PRO162	protein	taxon:9606	20220606	LBL	
 ! FAILS GORULE:0000027 - TEST 19 - 'Assigned by' is in dbxref.yaml but not in groups.yaml												
 UniProtKB	Q6UW15	REG3G	involved_in	GO:0006401	PMID:16931762	IDA		P	GORULE_TEST:0000027-18 Regenerating islet-derived protein 3-gamma	REG3G|PAP1B|UNQ429/PRO162	protein	taxon:9606	20220606	PO	
+! FAILS GORULE:0000027 - TEST 20 - Bad value in extension 'X'														
+PomBase	SPAC25B8.17	ypf1	is_active_in	GO:0005634	GO_REF:0000024	ISO	SGD:S000001583	C	GORULE_TEST:0000027-20 intramembrane aspartyl protease of the perinuclear ER membrane Ypf1 (predicted)	ppp81	protein	taxon:4896	20180912	PomBase	part_of(X:1)
 ! FAILS GORULE:0000028 - TEST 1 - Bad GO aspect, C instead of P														
 UniProtKB	Q9HC96	CAPN10	involved_in	GO:0006921	PMID:23072806	IDA		C	GORULE_TEST:0000028-1 Calpain-10	CAPN10,KIAA1845	protein	taxon:9606	20140213	GO_Central	
 ! FAILS GORULE:0000028 - TEST 2 - Bad GO aspect, F instead of P