Merge pull request #63 from fungenomics/dev

Dev
fungenomics · Sep 6, 2023 · e03cd3a · e03cd3a
2 parents f505b61 + 6e5ea35
commit e03cd3a
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diff --git a/.gitignore b/.gitignore
@@ -0,0 +1,8 @@
+.Rhistory
+.RData
+.snakemake/
+.ipynb_checkpoints
+config.yml
+test/
+Notebooks/annotate_report_cache/
+Notebooks/benchmark_report_cache/
diff --git a/Benchmarking/.snakemake/log/2022-09-08T133151.890209.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T133151.890209.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T133238.758946.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T133238.758946.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T141158.777553.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T141158.777553.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T141421.312624.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T141421.312624.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T141503.422813.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T141503.422813.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T141620.098535.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T141620.098535.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T141718.523238.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T141718.523238.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T141852.782530.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T141852.782530.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T142121.740084.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T142121.740084.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T142322.175430.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T142322.175430.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T142344.721772.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T142344.721772.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T142356.762010.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T142356.762010.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T142404.703381.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T142404.703381.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T142436.949686.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T142436.949686.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T142557.810546.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T142557.810546.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T143045.014696.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T143045.014696.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T143846.878355.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T143846.878355.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T143915.339453.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T143915.339453.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T144001.049537.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T144001.049537.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T144242.060011.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T144242.060011.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T144432.308860.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T144432.308860.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T144609.966021.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T144609.966021.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T144635.458546.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T144635.458546.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T144749.295035.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T144749.295035.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T144812.039084.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T144812.039084.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T144829.502825.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T144829.502825.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T145000.697165.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T145000.697165.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T145117.724678.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T145117.724678.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T145147.458529.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T145147.458529.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T145333.876334.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T145333.876334.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T145358.279667.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T145358.279667.snakemake.log
diff --git a/Benchmarking/.snakemake/log/2022-09-08T150009.566381.snakemake.log b/Benchmarking/.snakemake/log/2022-09-08T150009.566381.snakemake.log