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fix Dockerfile mv command + bump ver
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lmperry committed Jun 27, 2018
1 parent 3a39068 commit bd980db
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Showing 2 changed files with 5 additions and 5 deletions.
6 changes: 3 additions & 3 deletions Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -29,7 +29,7 @@ RUN apt-get update \
#'class' version 7.3.14
#'party' version 1.0.25
#'e1071' version 1.6.7
#'randomForest' version 4.6.12
#'randomForest' version 4.6.12

RUN apt-key adv --keyserver keyserver.ubuntu.com --recv-keys E084DAB9 && \
echo "deb http://cran.rstudio.com/bin/linux/ubuntu trusty/" >> /etc/apt/sources.list.d/cran-rstudio.list && \
Expand Down Expand Up @@ -88,7 +88,7 @@ ENV XAPPLRESDIR /opt/mcr/v85/X11/app-defaults
#############################################
# Download and install FSL 5.0.9

#Build-time key retrieval is sometimes unable to connect to keyserver. Instead, download the public key manually and store it in plaintext
#Build-time key retrieval is sometimes unable to connect to keyserver. Instead, download the public key manually and store it in plaintext
#within repo. You should run these commands occassionally to make sure the saved public key is up to date:
#gpg --keyserver hkp://pgp.mit.edu:80 --recv 0xA5D32F012649A5A9 && \
#gpg --export --armor 0xA5D32F012649A5A9 > neurodebian_pgpkey.txt && \
Expand Down Expand Up @@ -134,7 +134,7 @@ RUN apt-get -y update && \
wget -nv https://github.com/Washington-University/Pipelines/archive/90b0766636ba83f06c9198206cc7fa90117b0b11.tar.gz -O pipelines.tar.gz && \
cd /opt/ && \
tar zxvf /pipelines.tar.gz && \
mv /opt/Pipelines-* /opt/HCP-Pipelines && \
mv /opt/*ipelines* /opt/HCP-Pipelines && \
rm /pipelines.tar.gz && \
cd / && \
rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/*
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4 changes: 2 additions & 2 deletions manifest.json
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Expand Up @@ -8,9 +8,9 @@
"url": "https://github.com/Washington-University/Pipelines",
"source": "https://github.com/flywheel-apps/hcp-icafix",
"cite": "(1) G. Salimi-Khorshidi, G. Douaud, C.F. Beckmann, M.F. Glasser, L. Griffanti S.M. Smith. Automatic denoising of functional MRI data: Combining independent component analysis and hierarchical fusion of classifiers. NeuroImage, 90:449-68, 2014 (2) L. Griffanti, G. Salimi-Khorshidi, C.F. Beckmann, E.J. Auerbach, G. Douaud, C.E. Sexton, E. Zsoldos, K. Ebmeier, N. Filippini, C.E. Mackay, S. Moeller, J.G. Xu, E. Yacoub, G. Baselli, K. Ugurbil, K.L. Miller, and S.M. Smith. ICA-based artefact removal and accelerated fMRI acquisition for improved resting state network imaging. NeuroImage, 95:232-47, 2014",
"version": "0.1.1",
"version": "0.1.2",
"custom": {
"docker-image": "flywheel/hcp-icafix:0.1.1"
"docker-image": "flywheel/hcp-icafix:0.1.2"
},
"flywheel": {
"suite": "Human Connectome Project"
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