Ig fmriprep22.0.2 1

Dockerfile

@@ -1,13 +1,13 @@
-FROM nipreps/fmriprep:20.2.7
+FROM nipreps/fmriprep:22.0.2
 
-LABEL maintainer="[email protected]"
+LABEL maintainer="[email protected]"
 
 ENV FLYWHEEL /flywheel/v0
 WORKDIR ${FLYWHEEL}
 
 # Remove expired LetsEncrypt cert
-RUN rm /usr/share/ca-certificates/mozilla/DST_Root_CA_X3.crt && \
-    update-ca-certificates
+# RUN rm /usr/share/ca-certificates/mozilla/DST_Root_CA_X3.crt && \
+#    update-ca-certificates
 ENV REQUESTS_CA_BUNDLE "/etc/ssl/certs/ca-certificates.crt"
 
 # Save docker environ here to keep it separate from the Flywheel gear environment
@@ -22,7 +22,7 @@ RUN apt-get update && \
     tree && \
     rm -rf /var/lib/apt/lists/*
 
-RUN npm install -g bids-validator@1.8.4 \
+RUN npm install -g bids-validator@1.9.9 \
     [email protected] \
     [email protected]
 

manifest.json

@@ -313,13 +313,13 @@
         }
     },
     "custom": {
-        "docker-image": "flywheel/bids-fmriprep:1.4.1_20.2.7rc2",
+        "docker-image": "flywheel/bids-fmriprep:1.5.0_22.0.2ig1",
         "flywheel": {
             "suite": "BIDS Apps"
         },
         "gear-builder": {
             "category": "analysis",
-            "image": "flywheel/bids-fmriprep:1.4.1_20.2.7rc2"
+            "image": "flywheel/bids-fmriprep:1.5.0_22.0.2ig1"
         },
         "license": {
             "dependencies": [
@@ -351,7 +351,7 @@
             "non-commercial-use-only": true
         }
     },
-    "description": "fMRIPrep 20.2.7 (Long-Term Support version) is a functional magnetic resonance imaging (fMRI) data preprocessing pipeline that is designed to provide an easily accessible, state-of-the-art interface that is robust to variations in scan acquisition protocols and that requires minimal user input, while providing easily interpretable and comprehensive error and output reporting. It performs basic processing steps (coregistration, normalization, unwarping, noise component extraction, segmentation, skullstripping etc.) providing outputs that can be easily submitted to a variety of group level analyses, including task-based or resting-state fMRI, graph theory measures, surface or volume-based statistics, etc.",
+    "description": "fMRIPrep 22.0.2 is a functional magnetic resonance imaging (fMRI) data preprocessing pipeline that is designed to provide an easily accessible, state-of-the-art interface that is robust to variations in scan acquisition protocols and that requires minimal user input, while providing easily interpretable and comprehensive error and output reporting. It performs basic processing steps (coregistration, normalization, unwarping, noise component extraction, segmentation, skullstripping etc.) providing outputs that can be easily submitted to a variety of group level analyses, including task-based or resting-state fMRI, graph theory measures, surface or volume-based statistics, etc.",
     "environment": {
         "AFNI_IMSAVE_WARNINGS": "NO",
         "AFNI_MODELPATH": "/usr/lib/afni/models",
@@ -425,11 +425,11 @@
             "optional": true
         }
     },
-    "label": "BIDS fMRIPrep: A Robust Preprocessing Pipeline for fMRI Data",
+    "label": "IG_NYUAD BIDS fMRIPrep",
     "license": "BSD-3-Clause",
-    "maintainer": "Flywheel <[email protected]>",
-    "name": "bids-fmriprep",
+    "maintainer": "Iraj Gholami <[email protected]>",
+    "name": "bids-fmriprep-ig1",
     "source": "https://github.com/nipreps/fmriprep",
     "url": "https://github.com/flywheel-apps/bids-fmriprep/blob/master/README.md",
-    "version": "1.4.1_20.2.7"
+    "version": "1.5.0_22.0.2"
 }

pyproject.toml

@@ -1,16 +1,16 @@
 [tool.poetry]
 name = "bids-fmriprep"
-version = "1.4.0_20.2.7"
+version = "1.5.0+22.0.2"
 description = ""
-authors = ["Flywheel <[email protected]>"]
+authors = ["Iraj Gholami <[email protected]>"]
 license = "BSD-3-Clause"
 
 [tool.poetry.dependencies]
-python = "~3.7.1"
-flywheel-sdk = "~15.1.0"
-psutil = "~5.6.3"
-flywheel-gear-toolkit = "~0.1.3"
-flywheel-bids = "~0.9.1"
+python = "~3.9.12"
+flywheel-sdk = "~16.12.3"
+psutil = "~5.9.2"
+flywheel-gear-toolkit = "~0.6.8"
+flywheel-bids = "~0.9.4"
 toml = "^0.10.2"
 
 [tool.poetry.dev-dependencies]