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jhudsl-robot committed Jan 31, 2024
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12 changes: 6 additions & 6 deletions docs/02-research_team.md
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Expand Up @@ -14,17 +14,17 @@ Soil sampling for this project was done by both faculty and student volunteers f
- **Fresno, CA**: Clovis Community College
- **Greensboro, NC**: North Carolina A&T State University
- **Harrisonburg, VA**: James Madison University
- **Honolulu, Hawai'i**: University of Hawai'i at Mānoa
- **Las Cruces, NM**: Doña Ana Community College
- **Honolulu, Hawai'i**: University of Hawai'i at Mānoa
- **Las Cruces, NM**: Doña Ana Community College
- **Montgomery County, MD**: Montgomery College, Towson University
- **Nashville, TN**: Meharry Medical College
- **New York, NY**: Guttman Community COllege CUNY
- **New York, NY**: Guttman Community College CUNY
- **Petersburg, VA**: Virginia State University
- **Seattle, WA**: North Seattle College, Pierce College
- **Tsaile, AZ**: Diné College

- **Tsaile, AZ**: Diné College
## Funding

Funding for this project has been provided by the [National Human Genome Research Institute](https://www.genome.gov/) (Contract # 75N92022P00232 awarded to Johns Hopkins University), as well as by donations from [PacBio](https://www.pacb.com/) and [CosmosID](https://www.cosmosid.com/).

[Advances in Genome Biology and Technology](https://www.agbt.org/) provided funding support for several team members to attend AGBT 2024.
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20 changes: 10 additions & 10 deletions docs/404.html
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<meta name="date" content="2024-01-29" />
<meta name="date" content="2024-01-31" />

<meta name="viewport" content="width=device-width, initial-scale=1" />
<meta name="apple-mobile-web-app-capable" content="yes" />
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<link href="libs/anchor-sections-1.0.1/anchor-sections.css" rel="stylesheet" />
<script src="libs/anchor-sections-1.0.1/anchor-sections.js"></script>
<!-- Global site tag (gtag.js) - Google Analytics -->
<script async src="https://www.googletagmanager.com/gtag/js?id={MeasurementID}"></script>

<!-- Google tag (gtag.js) -->
<script async src="https://www.googletagmanager.com/gtag/js?id=G-Y0D3RZ5ZHX"></script>
<script>
window.dataLayer = window.dataLayer || [];
function gtag(){dataLayer.push(arguments);}
gtag('js', new Date());

gtag('config', '{MeasurementID}');
gtag('config', 'G-Y0D3RZ5ZHX');
</script>




<link rel="stylesheet" href="assets/style.css" type="text/css" />
<link rel="stylesheet" href="assets/AnVIL_style/anvil.css" type="text/css" />
<link rel="stylesheet" href="assets/GDSCN_style/gdscn.css" type="text/css" />
</head>

<body>
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<nav role="navigation">

<ul class="summary">
<a href="https://anvilproject.org/" target="_blank"><img src="assets/AnVIL_style/logo-anvil.png" style="width: 80%; padding-left: 15px; padding-top: 8px;"</a>
<a href="https://www.gdscn.org/" target="_blank"><img src="assets/GDSCN_style/logo-gdscn.png" style="width: 80%; padding-left: 15px; padding-top: 8px;"</a>

<li class="divider"></li>
<li class="chapter" data-level="" data-path="index.html"><a href="index.html"><i class="fa fa-check"></i>About this Book</a>
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<!--script src="https://kit.fontawesome.com/6a26f47516.js"></script-->
<!--<script src="assets/hideOutput.js"></script>-->
</head>



<div class="hero-image-container">
<img class= "hero-image" src="assets/AnVIL_style/dasl_thin_main_image.png">

<div class="hero-image-container">
<img class= "hero-image" src="assets/GDSCN_style/dasl_thin_main_image.png">
</div>
<div id="page-not-found" class="section level1">
<h1>Page not found</h1>
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2 changes: 1 addition & 1 deletion docs/About.md
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## collate en_US.UTF-8
## ctype en_US.UTF-8
## tz Etc/UTC
## date 2024-01-29
## date 2024-01-31
##
## ─ Packages ───────────────────────────────────────────────────────────────────
## package * version date lib source
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22 changes: 11 additions & 11 deletions docs/about-the-authors.html
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<meta name="date" content="2024-01-29" />
<meta name="date" content="2024-01-31" />

<meta name="viewport" content="width=device-width, initial-scale=1" />
<meta name="apple-mobile-web-app-capable" content="yes" />
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<link href="libs/anchor-sections-1.0.1/anchor-sections.css" rel="stylesheet" />
<script src="libs/anchor-sections-1.0.1/anchor-sections.js"></script>
<!-- Global site tag (gtag.js) - Google Analytics -->
<script async src="https://www.googletagmanager.com/gtag/js?id={MeasurementID}"></script>

<!-- Google tag (gtag.js) -->
<script async src="https://www.googletagmanager.com/gtag/js?id=G-Y0D3RZ5ZHX"></script>
<script>
window.dataLayer = window.dataLayer || [];
function gtag(){dataLayer.push(arguments);}
gtag('js', new Date());

gtag('config', '{MeasurementID}');
gtag('config', 'G-Y0D3RZ5ZHX');
</script>




<link rel="stylesheet" href="assets/style.css" type="text/css" />
<link rel="stylesheet" href="assets/AnVIL_style/anvil.css" type="text/css" />
<link rel="stylesheet" href="assets/GDSCN_style/gdscn.css" type="text/css" />
</head>

<body>
Expand All @@ -80,7 +80,7 @@
<nav role="navigation">

<ul class="summary">
<a href="https://anvilproject.org/" target="_blank"><img src="assets/AnVIL_style/logo-anvil.png" style="width: 80%; padding-left: 15px; padding-top: 8px;"</a>
<a href="https://www.gdscn.org/" target="_blank"><img src="assets/GDSCN_style/logo-gdscn.png" style="width: 80%; padding-left: 15px; padding-top: 8px;"</a>

<li class="divider"></li>
<li class="chapter" data-level="" data-path="index.html"><a href="index.html"><i class="fa fa-check"></i>About this Book</a>
Expand Down Expand Up @@ -205,11 +205,11 @@ <h1>
<!--script src="https://kit.fontawesome.com/6a26f47516.js"></script-->
<!--<script src="assets/hideOutput.js"></script>-->
</head>



<div class="hero-image-container">
<img class= "hero-image" src="assets/AnVIL_style/dasl_thin_main_image.png">

<div class="hero-image-container">
<img class= "hero-image" src="assets/GDSCN_style/dasl_thin_main_image.png">
</div>
<div id="about-the-authors" class="section level1 unnumbered">
<h1>About the Authors</h1>
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## collate en_US.UTF-8
## ctype en_US.UTF-8
## tz Etc/UTC
## date 2024-01-29
## date 2024-01-31
##
## ─ Packages ───────────────────────────────────────────────────────────────────
## package * version date lib source
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20 changes: 10 additions & 10 deletions docs/anvil-workspace.html
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<meta name="date" content="2024-01-29" />
<meta name="date" content="2024-01-31" />

<meta name="viewport" content="width=device-width, initial-scale=1" />
<meta name="apple-mobile-web-app-capable" content="yes" />
Expand Down Expand Up @@ -52,22 +52,22 @@

<link href="libs/anchor-sections-1.0.1/anchor-sections.css" rel="stylesheet" />
<script src="libs/anchor-sections-1.0.1/anchor-sections.js"></script>
<!-- Global site tag (gtag.js) - Google Analytics -->
<script async src="https://www.googletagmanager.com/gtag/js?id={MeasurementID}"></script>

<!-- Google tag (gtag.js) -->
<script async src="https://www.googletagmanager.com/gtag/js?id=G-Y0D3RZ5ZHX"></script>
<script>
window.dataLayer = window.dataLayer || [];
function gtag(){dataLayer.push(arguments);}
gtag('js', new Date());

gtag('config', '{MeasurementID}');
gtag('config', 'G-Y0D3RZ5ZHX');
</script>




<link rel="stylesheet" href="assets/style.css" type="text/css" />
<link rel="stylesheet" href="assets/AnVIL_style/anvil.css" type="text/css" />
<link rel="stylesheet" href="assets/GDSCN_style/gdscn.css" type="text/css" />
</head>

<body>
Expand All @@ -80,7 +80,7 @@
<nav role="navigation">

<ul class="summary">
<a href="https://anvilproject.org/" target="_blank"><img src="assets/AnVIL_style/logo-anvil.png" style="width: 80%; padding-left: 15px; padding-top: 8px;"</a>
<a href="https://www.gdscn.org/" target="_blank"><img src="assets/GDSCN_style/logo-gdscn.png" style="width: 80%; padding-left: 15px; padding-top: 8px;"</a>

<li class="divider"></li>
<li class="chapter" data-level="" data-path="index.html"><a href="index.html"><i class="fa fa-check"></i>About this Book</a>
Expand Down Expand Up @@ -205,11 +205,11 @@ <h1>
<!--script src="https://kit.fontawesome.com/6a26f47516.js"></script-->
<!--<script src="assets/hideOutput.js"></script>-->
</head>



<div class="hero-image-container">
<img class= "hero-image" src="assets/AnVIL_style/dasl_thin_main_image.png">

<div class="hero-image-container">
<img class= "hero-image" src="assets/GDSCN_style/dasl_thin_main_image.png">
</div>
<div id="anvil-workspace" class="section level1" number="5">
<h1><span class="header-section-number">Chapter 5</span> AnVIL Workspace</h1>
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48 changes: 0 additions & 48 deletions docs/assets/AnVIL_style/anvil.css

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99 changes: 99 additions & 0 deletions docs/assets/GDSCN_style/gdscn.css
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@@ -0,0 +1,99 @@

/* GDSCN style */
/* Change colors to match GDSCN logo */
/* Things below this comment are GDSCN customizations */

.hero-image-container {
height: 100px;
}

.page-inner {
padding-top: 60px !important;
}

.book .book-body .page-wrapper .page-inner section.normal h1,
.book .book-body .page-wrapper .page-inner section.normal h2,
.book .book-body .page-wrapper .page-inner section.normal h3,
.book .book-body .page-wrapper .page-inner section.normal h4,
.book .book-body .page-wrapper .page-inner section.normal h5,
.book .book-body .page-wrapper .page-inner section.normal h6 {
margin-top: 1em;
margin-bottom: 1em;
}

:root {
--highlight-txt-color: #73b263;
--main-txt-color: #274731;
}

.trapezoid {
width: 132px;
text-align: center;
position: relative;
left: 10px;
border-right: 50px solid --main-txt-color;
border-bottom: 50px solid #dbdbdb;
border-left: 50px solid --main-txt-color;
box-sizing: content-box;
}
.trapezoid span {
position: absolute;
top: 8px;
bottom: 5px;
left: 5%;
color: #dbdbdb;
}

/* Module chunk shading --------------------------------------------*/
div.borrowed_chunk {
padding: 1em;
margin: 1em 0;
min-height: 120px;
background-repeat: no-repeat;
background-color: #eff7fe;
}

.book .book-body .page-wrapper .page-inner section.normal a {
color: var(--highlight-txt-color);
}

.title {
color: var(--main-txt-color);
}

.section.level1 > p:first-of-type:first-letter { /*drop cap for first p beneath level 1 headers only within class .section*/
color: var(--main-txt-color);
}

.book .book-summary a {
color: var(--main-txt-color);
}

/* all TOC list items, basically */
.book .book-summary ul.summary li a,
.book .book-summary ul.summary li span {
color: var(--main-txt-color);
}

.summary a:hover {
color: var(--highlight-txt-color) !important;
}

.book .book-summary ul.summary li.active>a { /*active TOC links*/
color: var(--highlight-txt-color) !important;
border-color: var(--highlight-txt-color);
}

.trapezoid {
border-right: 50px solid var(--main-txt-color);
border-left: 50px solid var(--main-txt-color);
}

div.notice, div.dictionary, div.reflection {
border: 4px var(--highlight-txt-color);
border-style: solid;
}

.footer {
color: var(--main-txt-color);
}
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