- UTC+1 (UTC+2)
-
PyScanFCS Public
Forked from FCS-analysis/PyScanFCSdata evaluation in perpendicular line scanning FCS
Python Other UpdatedFeb 8, 2025 -
Bio-EUtilities Public
Forked from bioperl/Bio-EUtilitiesLow-level OO Perl interface for NCBI's eutils
Perl UpdatedJan 27, 2025 -
-
-
Unicycler Public
Forked from rrwick/Unicyclerhybrid assembly pipeline for bacterial genomes
C++ GNU General Public License v3.0 UpdatedDec 9, 2024 -
leidenalg Public
Forked from vtraag/leidenalgImplementation of the Leiden algorithm for various quality functions to be used with igraph in Python.
Python GNU General Public License v3.0 UpdatedDec 6, 2024 -
iva Public
Forked from sanger-pathogens/ivade novo virus assembler of Illumina paired reads
Python Other UpdatedDec 4, 2024 -
UNCALLED Public
Forked from skovaka/UNCALLEDRaw nanopore signal mapper that enables real-time targeted sequencing
C++ MIT License UpdatedDec 3, 2024 -
Scoary Public
Forked from AdmiralenOla/ScoaryPan-genome wide association studies
Python GNU General Public License v3.0 UpdatedDec 2, 2024 -
-
colorspacious Public
Forked from njsmith/colorspaciousA powerful, accurate, and easy-to-use Python library for doing colorspace conversions
Python MIT License UpdatedNov 29, 2024 -
treetime Public
Forked from neherlab/treetimeMaximum likelihood inference of time stamped phylogenies and ancestral reconstruction
Jupyter Notebook MIT License UpdatedNov 9, 2024 -
pauvre Public
Forked from conchoecia/pauvrePauvre: QC and genome browser plotting Oxford Nanopore and PacBio long reads.
C UpdatedNov 7, 2024 -
bcbb Public
Forked from chapmanb/bcbbIncubator for useful bioinformatics code, primarily in Python and R
Python UpdatedNov 5, 2024 -
bmtk Public
Forked from AllenInstitute/bmtkBrain Modeling Toolkit
Python BSD 3-Clause "New" or "Revised" License UpdatedOct 16, 2024 -
Fastaq Public
Forked from sanger-pathogens/FastaqPython3 scripts to manipulate FASTA and FASTQ files
Python Other UpdatedOct 16, 2024 -
jam-lib Public
Forked from rambaut/jam-libAutomatically exported from code.google.com/p/jam-lib
Java UpdatedOct 11, 2024 -
dnaio Public
Forked from marcelm/dnaioEfficiently read and write sequencing data from Python
Python MIT License UpdatedOct 9, 2024 -
pyfaidx Public
Forked from mdshw5/pyfaidxEfficient pythonic random access to fasta subsequences
Python Other UpdatedOct 9, 2024 -
Neuroimaging in Python FMRI analysis package
Python Other UpdatedOct 4, 2024 -
biopython Public
Forked from biopython/biopythonOfficial git repository for Biopython (originally converted from CVS)
Python Other UpdatedSep 18, 2024 -
MindTheGap Public
Forked from GATB/MindTheGapMindTheGap is a SV caller for short read sequencing data dedicated to insertion variants (all sizes and types). It can also be used as a local assembly tool.
C++ GNU Affero General Public License v3.0 UpdatedSep 6, 2024 -
seqcluster Public
Forked from lpantano/seqclustersmall RNA analysis from NGS data
HTML MIT License UpdatedAug 24, 2024 -
pairix Public
Forked from 4dn-dcic/pairix1D/2D indexing and querying on bgzipped text file with a pair of genomic coordinates
C MIT License UpdatedAug 23, 2024 -
cuteSV Public
Forked from tjiangHIT/cuteSVLong read based human genomic structural variation detection with cuteSV
Python MIT License UpdatedAug 22, 2024 -
zonemaster-cli Public
Forked from zonemaster/zonemaster-cliThe Zonemaster CLI - part of the Zonemaster project
Perl Other UpdatedAug 21, 2024 -
zonemaster-engine Public
Forked from zonemaster/zonemaster-engineThe Zonemaster Engine - part of the Zonemaster project
Perl Other UpdatedAug 21, 2024 -
brian2 Public
Forked from brian-team/brian2Brian is a free, open source simulator for spiking neural networks.
Python Other UpdatedAug 11, 2024 -
thesias Public
Forked from daissi/thesiasTHESIAS: Testing Haplotype Effects In Association Studies
C GNU General Public License v3.0 UpdatedJul 28, 2024 -
perl-math-gsl Public
Forked from hakonhagland/perl-math-gslBuilding Math::GSL with GitHub Actions
Perl UpdatedJul 25, 2024