Updating the required depth to 2

dnanexus-rnd · Mar 13, 2024 · 42e0047 · 42e0047
1 parent fae491b
commit 42e0047
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/src/cli_utils.cc b/src/cli_utils.cc
@@ -830,7 +830,7 @@ static const char* config_presets_yml = R"eof(
         monoallelic_sites_for_lost_alleles: true
         max_alleles_per_site: 32
     genotyper_config:
-        required_dp: 0
+        required_dp: 2
         revise_genotypes: true
         snv_prior_calibration: 0.6
         indel_prior_calibration: 0.45