Fixing broken exon module symlink

dieterich-lab · Aug 3, 2018 · 6ff6ddc · 6ff6ddc
1 parent 1aec4d0
commit 6ff6ddc
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Showing 4 changed files with 3 additions and 4 deletions.
diff --git a/circtools/circtools.py b/circtools/circtools.py
@@ -20,7 +20,7 @@
 import os.path
 
 # global settings
-version = "1.1.0.5"
+version = "1.1.0.6"
 program_name = "circtools"
 
 

diff --git a/circtools/exon_usage/exon_usage.py b/circtools/exon_usage/exon_usage.py
@@ -124,7 +124,7 @@ def run_module(self):
         # ------------------------------------ need to call the correct R script here -----------------------
 
         # need to define path top R wrapper
-        exon_script = 'circtools_exon'
+        exon_script = 'circtools_exon_wrapper.R'
 
         # Variable number of args in a list
         args = [

diff --git a/scripts/exon_usage_circtools_wrapper.R → scripts/circtools_exon_wrapper.R b/scripts/exon_usage_circtools_wrapper.R → scripts/circtools_exon_wrapper.R
diff --git a/setup.py b/setup.py
@@ -96,7 +96,7 @@ def run(self):
     # Versions should comply with PEP440.  For a discussion on single-sourcing
     # the version across setup.py and the project code, see
     # https://packaging.python.org/en/latest/single_source_version.html
-    version='1.1.0.5',
+    version='1.1.0.6',
 
     description='circtools - a circular RNA toolbox',
     long_description=long_description,
@@ -206,7 +206,6 @@ def run(self):
         'scripts/circtools',
         'scripts/circtools_detect_write_skip_tracks.pl',
         'scripts/circtools_enrich_visualization.R',
-        'scripts/circtools_exon',
         'scripts/circtools_quickcheck_wrapper.R',
         'scripts/circtools_reconstruct_visualization.R',
         'scripts/circtools_primex_wrapper.R',