Merge pull request #371 from dgarijo/develop

Develop
dgarijo · Jan 12, 2020 · 23bced8 · 23bced8
2 parents bf1c138 + 120aeb4
commit 23bced8
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Showing 3 changed files with 43 additions and 26 deletions.
diff --git a/src/main/java/widoco/Constants.java b/src/main/java/widoco/Constants.java
@@ -814,6 +814,8 @@ public static String getHeadSection(Configuration c, Properties l) {
 					+ "<a href=\"webvowl/index.html#\" target=\"_blank\"><img src=\"https://img.shields.io/badge/Visualize_with-WebVowl-blue.svg\" alt=\"Visualize with WebVowl\" /></a>"
 					+ "</dd>\n";
 		}
+                //add commented a reference in case the evaluation is to be included
+                head+="<!-- <dt>Evaluation:</dt><dd><a href=\"OOPSEvaluation/OOPSeval.html#\" target=\"_blank\"><img src=\"https://img.shields.io/badge/Evaluate_with-OOPS! (OntOlogy Pitfall Scanner!)-blue.svg\" alt=\"Evaluate with OOPS!\" /></a></dd> -->";
 		if (!"".equals(c.getMainOntology().getCiteAs()) && c.getMainOntology().getCiteAs() != null) {
 			head += "<dt>" + l.getProperty(LANG_CITE_AS) + "</dt>\n<dd>" + c.getMainOntology().getCiteAs() + "</dd>\n";
 		}

diff --git a/src/main/java/widoco/CreateOOPSEvalInThread.java b/src/main/java/widoco/CreateOOPSEvalInThread.java
@@ -19,6 +19,11 @@
 import java.io.BufferedReader;
 import java.io.File;
 import java.io.FileReader;
+import java.nio.charset.Charset;
+import java.nio.charset.StandardCharsets;
+import java.nio.file.Files;
+import java.nio.file.Path;
+import java.nio.file.Paths;
 
 import org.slf4j.Logger;
 import org.slf4j.LoggerFactory;
@@ -79,29 +84,42 @@ public void run() {
 				br.close();
 			}
 			if (content != null && !content.equals("")) {
-				File evalFolder = new File(c.getDocumentationURI() + File.separator + "OOPSevaluation");
-				// for the css etc.
-				File evalResourcesFolder = new File(evalFolder.getAbsolutePath() + File.separator + "evaluation");
-				if (!evalFolder.exists())
-					evalFolder.mkdir();
-				evalResourcesFolder.mkdir();
-				// CreateResources.copyResourceFolder(TextConstants.oopsResources,
-				// evalResourcesFolder.getAbsolutePath());
-				WidocoUtils.unZipIt(Constants.OOPS_RESOURCES, evalResourcesFolder.getAbsolutePath());
-				eval = new OOPSevaluation("", content);
-				// eval = new OOPSevaluation(c.getMainOntology().getNamespaceURI(),"");
-				evaluation = eval.printEvaluation();
-				// SAVE File
-				if (showGui) {
-					this.pointerToMain.switchState("savingResponse");
-				}
-				logger.info("Saving response...");
-				CreateResources.saveDocument(evalFolder.getAbsolutePath() + File.separator + "oopsEval.html",
-						Constants.getEvaluationText(evaluation, c), c);
-				if (showGui) {
-					pointerToMain.openBrowser(
-							new File(evalFolder.getAbsolutePath() + File.separator + "oopsEval.html").toURI());
-				}
+                            String pathOut = c.getDocumentationURI();
+                            if (!c.getMainOntology().isHashOntology()) {
+                                    pathOut += File.separator + "doc";
+                            }
+                            File evalFolder = new File(pathOut + File.separator + "OOPSevaluation");
+                            // for the css etc.
+                            File evalResourcesFolder = new File(evalFolder.getAbsolutePath() + File.separator + "evaluation");
+                            if (!evalFolder.exists())
+                                    evalFolder.mkdir();
+                            evalResourcesFolder.mkdir();
+                            // CreateResources.copyResourceFolder(TextConstants.oopsResources,
+                            // evalResourcesFolder.getAbsolutePath());
+                            WidocoUtils.unZipIt(Constants.OOPS_RESOURCES, evalResourcesFolder.getAbsolutePath());
+                            eval = new OOPSevaluation("", content);
+                            // eval = new OOPSevaluation(c.getMainOntology().getNamespaceURI(),"");
+                            evaluation = eval.printEvaluation();
+                            // SAVE File
+                            if (showGui) {
+                                    this.pointerToMain.switchState("savingResponse");
+                            }
+                            logger.info("Saving response...");
+                            CreateResources.saveDocument(evalFolder.getAbsolutePath() + File.separator + "oopsEval.html",
+                                            Constants.getEvaluationText(evaluation, c), c);
+                            //edit html file with the right pointer to the evaluation. For all languages
+                            for (String lang: c.getLanguagesToGenerateDoc()){    
+                                Path path = Paths.get(pathOut+File.separator+"index-"+lang+".html");
+                                Charset charset = StandardCharsets.UTF_8;
+                                String htmlContent = new String(Files.readAllBytes(path), charset);
+                                content = htmlContent.replace("<!-- <dt>Evaluation:</dt><dd><a href=\"OOPSEvaluation/OOPSeval.html#\" target=\"_blank\"><img src=\"https://img.shields.io/badge/Evaluate_with-OOPS! (OntOlogy Pitfall Scanner!)-blue.svg\" alt=\"Evaluate with OOPS!\" /></a></dd> -->",
+                                        "<dt>Evaluation:</dt><dd><a href=\"OOPSEvaluation/OOPSeval.html#\" target=\"_blank\"><img src=\"https://img.shields.io/badge/Evaluate_with-OOPS! (OntOlogy Pitfall Scanner!)-blue.svg\" alt=\"Evaluate with OOPS!\" /></a></dd>");
+                                Files.write(path, content.getBytes(charset));
+                            }
+                            if (showGui) {
+                                    pointerToMain.openBrowser(
+                                                    new File(evalFolder.getAbsolutePath() + File.separator + "oopsEval.html").toURI());
+                            }
 			} else {
 				throw new Exception("OOPS server did not return an evaluation report");
 			}

diff --git a/src/main/java/widoco/CreateResources.java b/src/main/java/widoco/CreateResources.java
@@ -22,7 +22,6 @@
 import java.io.File;
 import java.io.FileOutputStream;
 import java.io.IOException;
-import java.io.OutputStream;
 import java.io.OutputStreamWriter;
 import java.io.Writer;
 import java.util.ArrayList;
@@ -31,14 +30,12 @@
 import javax.swing.JOptionPane;
 import lode.LODEGeneration;
 import org.apache.log4j.Logger;
-import org.semanticweb.owlapi.formats.N3DocumentFormat;
 import org.semanticweb.owlapi.formats.NTriplesDocumentFormat;
 import org.semanticweb.owlapi.formats.RDFJsonLDDocumentFormat;
 import org.semanticweb.owlapi.formats.RDFXMLDocumentFormat;
 import org.semanticweb.owlapi.formats.TurtleDocumentFormat;
 import org.semanticweb.owlapi.model.OWLOntology;
 import org.semanticweb.owlapi.model.OWLOntologyManager;
-import static widoco.Constants.LANG_NS;
 import widoco.entities.Agent;
 import widoco.entities.Ontology;