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dereneaton authored Aug 22, 2016
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ipyrad: Interactive assembly and analysis of RAD-seq data sets
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Welcome to ipyrad, an interactive toolkit for assembly and analysis of restriction-site associated genomic data sets (e.g., RAD, ddRAD, GBS) for population genetic and phylogenetic studies.
*ipyrad*: interactive assembly and analysis of RAD-seq data sets
--------------------------------------------------------------

Welcome to ipyrad, an interactive toolkit for assembly and analysis of
restriction-site associated genomic data sets (e.g., RAD, ddRAD, GBS)
for population genetic and phylogenetic studies.

Documentation
---------
Full documentation is available here (`<http://ipyrad.readthedocs.io>`_),
where you will find installation instructions, example tutorials, and a full user guide.


Quick Install
------------
ipyrad is available through conda with all dependencies included. If you have conda installed you can simply:
ipyrad is available through the Python package installer `conda` with all dependencies included.
If you have `conda` installed you can simply run::

conda install -c ipyrad ipyrad

If you do not have conda you will enjoy our `complete installation instructions <http://ipyrad.readthedocs.io/installation.html>`_.

Documentation
---------
`Full documentation <http://ipyrad.readthedocs.io>`_ is available on our readthedocs site. There you will find installation instructions, example tutorials, and a full user guide.
If you do not have `conda` installed then you will enjoy our
`complete installation instructions <http://ipyrad.readthedocs.io/installation.html>`_.

Quick link to the `full tutorial <http://ipyrad.readthedocs.io/tutorial_intro_cli.html>`_.

Getting Help
------------
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