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Merge branch 'dev' into element-dlc-test
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MilagrosMarin authored Oct 2, 2023
2 parents c0b6ed2 + fce53d3 commit c94f336
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2 changes: 1 addition & 1 deletion .github/workflows/release.yaml
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Expand Up @@ -24,4 +24,4 @@ jobs:
uses: datajoint/.github/.github/workflows/devcontainer-publish.yaml@main
secrets:
DOCKERHUB_USERNAME: ${{secrets.DOCKERHUB_USERNAME}}
DOCKERHUB_TOKEN: ${{secrets.DOCKERHUB_TOKEN_FOR_ELEMENTS}}
DOCKERHUB_TOKEN: ${{secrets.DOCKERHUB_TOKEN_FOR_ELEMENTS}}
1 change: 0 additions & 1 deletion .github/workflows/test.yaml
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Expand Up @@ -34,4 +34,3 @@ jobs:
python_version=${{matrix.py_ver}}
black element_deeplabcut --check --verbose --target-version py${python_version//.}
black notebooks --check --verbose --target-version py${python_version//.}
6 changes: 6 additions & 0 deletions CHANGELOG.md
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Observes [Semantic Versioning](https://semver.org/spec/v2.0.0.html) standard and
[Keep a Changelog](https://keepachangelog.com/en/1.0.0/) convention.

## [0.2.8] - 2023-08-07

+ Update - GitHub Actions with new reusable workflows
+ Update - Readme instructions

## [0.2.7] - 2023-08-04

+ Fix - Update the project path in the pose config file to train the model
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graciously provided by the Mathis Lab.
+ Add - Support for 2d single-animal models

[0.2.8]: https://github.com/datajoint/element-deeplabcut/releases/tag/0.2.8
[0.2.7]: https://github.com/datajoint/element-deeplabcut/releases/tag/0.2.7
[0.2.6]: https://github.com/datajoint/element-deeplabcut/releases/tag/0.2.6
[0.2.5]: https://github.com/datajoint/element-deeplabcut/releases/tag/0.2.5
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29 changes: 28 additions & 1 deletion README.md
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# DataJoint Element - DeepLabCut
[![PyPI version](https://badge.fury.io/py/element-deeplabcut.svg)](http://badge.fury.io/py/element-deeplabcut)

# DataJoint Element for Pose Estimation with DeepLabCut

DataJoint Element for markerless pose estimation with
[DeepLabCut](https://www.deeplabcut.org/). DataJoint Elements collectively standardize
Expand All @@ -23,3 +25,28 @@ Installation and usage instructions can be found at the
[Element documentation](https://datajoint.com/docs/elements/element-deeplabcut).

![element-deeplabcut diagram](https://raw.githubusercontent.com/datajoint/element-deeplabcut/main/images/diagram_dlc.svg)

## Experiment Flowchart

![flowchart](https://raw.githubusercontent.com/datajoint/element-deeplabcut/main/images/flowchart.svg)

## Data Pipeline Diagram

![pipeline](https://raw.githubusercontent.com/datajoint/element-deeplabcut/main/images/pipeline.svg)

## Getting Started

+ Install from PyPI

```bash
pip install element-deeplabcut
```

+ [Interactive tutorial](https://github.com/datajoint/workflow-deeplabcut)

+ [Documentation](https://datajoint.com/docs/elements/element-deeplabcut)

## Support

+ If you need help getting started or run into any errors, please open a GitHub Issue
or contact our team by email at [email protected].
2 changes: 1 addition & 1 deletion element_deeplabcut/version.py
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"""
Package metadata
"""
__version__ = "0.2.7"
__version__ = "0.2.8"
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