Merge pull request #61 from chrishavlin/packaging_updates

Packaging updates

setup.cfg → .flake8

@@ -1,6 +1,3 @@
-[bdist_wheel]
-universal = 1
-
 [flake8]
 max-line-length = 88
 exclude = docs,

.github/workflows/check-build.yml

@@ -13,9 +13,9 @@ jobs:
         python-version: '3.10'
     - name: Install dependencies
       run: |
-        python -m pip install --upgrade pip
-        python -m pip install -U setuptools wheel twine
-    - name: Build and check
-      run: |
-        python setup.py sdist bdist_wheel
-        twine check dist/*
+          python -m pip install --upgrade pip
+          python -m pip install -U build twine
+    - name: Build and check source tarball
+      run: python -m build
+    - name: Twine check
+      run: twine check dist/*

.github/workflows/publish-to-pypi.yml

@@ -20,9 +20,9 @@ jobs:
     - name: Install dependencies
       run: |
           python -m pip install --upgrade pip
-          python -m pip install -U setuptools setuptools_scm wheel twine
+          python -m pip install -U build twine
     - name: Build and check source tarball
-      run: python setup.py sdist bdist_wheel
+      run: python -m build
     - name: Twine check
       run: twine check dist/*
     - name: Publish distribution to PyPI

.github/workflows/run-pytest-tests.yml

@@ -17,19 +17,15 @@ jobs:
       uses: actions/setup-python@v4
       with:
         python-version: ${{ matrix.python-version }}
-    - name: Install dependencies
-      run: |
-        python -m pip install --upgrade pip
-        python -m pip install -r requirements_dev.txt
     - name: Setup yt_xarray
       run: |
-        python -m pip install -e .
+        python -m pip install --upgrade pip
+        python -m pip install -e .[full,test]
     - name: Run Tests
       run: pytest --cov=./ --cov-report=xml:coverage/coverage.xml
 
     # https://github.com/marketplace/actions/codecov#example-workflowyml-with-codecov-action
     - name: Upload coverage to Codecov
-      if: matrix.os == 'ubuntu-latest'
       uses: codecov/codecov-action@v3
       with:
         directory: ./coverage/

.github/workflows/weekly-test.yml

@@ -20,11 +20,9 @@ jobs:
           uses: actions/setup-python@v4
           with:
             python-version: ${{ matrix.python-version }}
-        - name: Install dependencies
-          run: |
-                python -m pip install --upgrade pip
-                python -m pip install -r requirements_dev.txt
         - name: Setup yt_xarray
-          run: python -m pip install -e .
+          run: |
+            python -m pip install --upgrade pip
+            python -m pip install -e .[full,test]
         - name: Run Tests
           run: pytest -v .

.readthedocs.yaml

@@ -14,6 +14,7 @@ build:
 # Optionally declare the Python requirements required to build your docs
 python:
    install:
-   - requirements: requirements.txt
-   - requirements: requirements_dev.txt
-   - requirements: requirements_docs.txt
+    - method: pip
+      path: .
+      extra_requirements:
+        - docs

MANIFEST.in

@@ -6,6 +6,7 @@ include *.yaml
 include Makefile
 include tox.ini
 include .coveragerc
+include .flake8
 recursive-include tests *
 recursive-exclude * __pycache__
 recursive-exclude * *.py[co]

pyproject.toml

@@ -1,6 +1,40 @@
+[build-system]
+requires = ["setuptools>=61.0"]
+build-backend = "setuptools.build_meta"
+
+[project]
+name = "yt_xarray"
+version = "0.1.4"
+authors = [
+  { name="Chris Havlin", email="[email protected]" },
+]
+description="interface between yt and xarray"
+readme = "README.md"
+requires-python = ">=3.9"
+classifiers = [
+    "Development Status :: 4 - Beta",
+    "Intended Audience :: Developers",
+    "License :: OSI Approved :: MIT License",
+    "Natural Language :: English",
+    "Programming Language :: Python :: 3",
+    "Programming Language :: Python :: 3.9",
+    "Programming Language :: Python :: 3.10",
+    "Programming Language :: Python :: 3.11",
+]
+dependencies=['yt>=4.2.0', 'h5py>=3.4.0', 'pooch>=1.5.1', 'xarray']
+
+[project.urls]
+"Homepage" = "https://github.com/data-exp-lab/yt_xarray"
+"Bug Tracker" = "https://github.com/data-exp-lab/yt_xarray/issues"
+
+[project.optional-dependencies]
+full = ["netCDF4", "scipy", "dask[complete]"]
+test = ["pytest", "pytest-cov"]
+docs = ["Sphinx==1.8.5", "jinja2<3.1.0", "nbsphinx"]
+
 [tool.black]
 line-length = 88
-target-version = ['py37']
+target-version = ['py310']
 
 [tool.isort]
 profile = "black"

requirements_docs.txt

@@ -1,3 +0,0 @@
-Sphinx==1.8.5
-jinja2<3.1.0
-nbsphinx