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Irf maker and cut optimiser#2473

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Tobychev wants to merge 189 commits intomaincta-observatory/ctapipe:mainfrom irf-makercta-observatory/ctapipe:irf-makerCopy head branch name to clipboard

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Commits on Jan 21, 2025

• First kludge of protopipe irf code as a ctapipe tool

  

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• Fixed names so the tool can install properly

  

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• Fixing two small comments from Karl

  

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• Various small fixes

  

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• Big refactor to use components as intended

  

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• Got it all to run

  

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• Formatting fixes

  

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• Adjusting defaults to make only one bin in offset?

  

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• Moved preselection to start()

  

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• Use only one true energy axis

  

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• Use only one true energy axis

  

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• Use only one true energy axis

  

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• Refactoring to group things in the same manner

  

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• Split preselct into remaning and quality selecting, made EventPreProcessor a quality query

  

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• Fixed serveral problems

  

  Tomas Bylund

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• Fixed unit issue

  

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• Updated some defaults

  

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• Updated some comments to avoid problems with the doctest

  

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• Add changelog

  

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• Fixed small bug, trying to pass doctests

  

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• Refactored after feedback

  

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• Refactored after feedback

  

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• Refactored after feedback

  

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• Made spectra into enums

  

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• Added specific configuration of the optimisation grid to the cut optimiser component

  

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• Refactored based on feedback: new tests that simulations stay consistent and some renaming

  

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• Refactored based on feedback: cleaner test

  

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• Various changes to match reference script.

  

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• Reworked how initial theta cuts are calculated, changed some logging printouts

  

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• Update conf.py

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• Moved PSF related quantities into its own component

  

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• Renamed PSF component to ThetaCutsCalculator, other small refactors

  

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• Update to support newest pyirf version

  

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• Fix logging error

  

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• Use consistent offset binning

  

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• Add theta cut to the background, change logging statments

  

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• Partial refactoring into optimising and calculating parts

  

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• Mayor refactor complete, still not running properly

  

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• Various changes to get the code to run end to end

  

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• Pretty large refactoring around how results are saved, cleaned out some not purely irf tables from the output

  

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• Further refactoring to decouple things now that there are two tools

  

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• Added background and benchmarking option to the make_irf tool

  

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• removed some dead code that had been left behind by mistake

  

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• Minor fixes

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• Ensure users requested binning is honoured

  

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• Fixed typo in EXTNAME of energy dispersion

  

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• Add several convenience functions for plotting irfs

  

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• Added function to draw 2d hist from a irf table

  

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• Use integar indices for fov bounds; fix write out of benchmark hdus

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• Remove redundant overwrite flag

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• Add some aliases and flags; fix logging bug

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• Rename some files and classes

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• Make EventPreProcessor a subcomponent of EventsLoader

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• Use reco energy for rad_max table

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• Use n_bins everywhere instead of n_edges

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• Add reco bins to logging; remove unused bins

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• Fix EventPreProcessor configurability

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• Make ThetaCutsCalculator configurable

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• Fix help for n_bins config options

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• Added helper function for plotting just bin-wise statistics of IRF tables

  

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• Added energy binning directly to the PsfIrf class

  

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• Created a Background2D and Background3D IRF classes

  

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• Add option for point-like IRF; support diffuse and point-like gammas

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• Update to consistently use number of bins

  

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• Added calculation of fov_lat/lon and explicit column descriptions

  

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• Added a bit of logging

  

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• Remove unnecessary conversions

  

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• Moved stuff to match src/ organisatoin

  

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• Fix extra dimension in effective area per offset, adapt to new loader syntax

  

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• Fixed bug where background only used gh-cuts

  

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• Renamed some options for clarity

  

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• Clarified arguments for full-enclosure irfs

  

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• Sort and remove duplicates in sphinx nitpicks

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• Use AstroQuantity trait for observation time

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• Add definition of selectable spectra to irf.select

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• Force same clf for computation and application of g/h cuts; warn if overwriting precuts in irf-tool

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• Use full-enclosure flag for cut optimization tool

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• Remove theta cut re-calculation from irf-tool; move ThetaCutsCalculator to optimize.py; add individual binning to ThetaCutsCalculator

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• Make saving a theta cut optional in cut-opt tool and if saved, also save it as RAD_MAX

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• Remove redundant bin range check

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• Apply event selection per particle type

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• More AstroQuantity

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• Rework irf classes

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• Make irf parameterizations configurable

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• Move spectra definition to separate file

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• Revert change of edisp extname

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• Also calculate aeff for protons and electrons

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• Update cut optimization components and make cut opt algorithm configurable

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• Clearer class names

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• Remove FoVOffsetBinning; save singular quantities in ResultValidRange

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• No cut on background events based on its true origin position

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• Split out input handling code to separate helper to keep logic of init more clear

  

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• Fixed typo

  

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• Set min pyirf version to handle astropy 6.0

  

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• Create a minimal changelog

  

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• Use classes_with_traits() in tools

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• cleaning up changelogs

  

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• Added messages explaining which bin range was failing to pass the check

  

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• Respect bounds over n_bins_per_decade for energy binning

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• Made range check optionally only emit warning, made output a bit more readable

  

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• Added tracking of where range check came from, made check failure optionally emit warning

  

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• Discared Lukas changes in error

  

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• Fixed some code quality issues from sonar

  

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• Fixed typo

  

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• Fixed problems where PSF was not always being generate

  

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• Added optional colorbar plotting to plot_hist2d, additional small fixes

  

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• Move benchmarks into dedicated Components; remove OutputEnergyBinning

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• Add type hints to EventsLoader and EventPreProcessor

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• Add fov binning for benchmarks

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• Only compute psf for full enclosure irf

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• Allow user renaming of cols and check for needed cols after

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• Add tests for event loading and selection code; minor bugfix

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• Shorten bins in range checks a bit

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• Fix number of bin edges in make_bins_per_decade

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• parent=None as default for all components

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• Add tests for binning

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• Fix caplog binning test

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• Do not use caplog in test, due to problems with pytest-xdist

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• Do not expose base classes

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• Add missing docstring

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• Fix imports in binning tests

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• Remove wrong bin-in-range checks; fix valid_fov_offset

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• Only compute event weights, if a sensitivity is computed

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• Make proton and electron files optional, if PercentileCuts is used

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• Move pytest fixtures to conftest.py

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• Some tests for cut optimization

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• Fixed hardcoded nonsensical offset bins for RAD_MAX

  

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• Add test to ensure BackgroundRate2dMaker stays working once current regression is fixed

  

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• Fixed broken background generation

  

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• Rework event weight calculation

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• Fix background2D test

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• More tests for optimization components

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• Iterate over cut optimizers in optimize tests

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• Add more tests for irf makers

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• Small refactoring of irf tests

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• Add tests for benchmarks; fix axis order in benchmark output

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• Address some comments

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• replace removed in numpy 2.0

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• Add unit definition, docstring, fix table name

  

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• Fixed bug with weights not being set properly

  

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• Make header row using columns directly

  

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• fixed conftest table generation to work around bug with dimensionless columns

  

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• Linspace to match bins from official IRFs

  

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• harmonised column names

  

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• Made linear bins optional, adjusted wording of help strings

  

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• Trying to work around pyIrf errors

  

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• Rename EnergyMigrationMaker to EnergyDispersionMaker to avoid confusion

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• Replace do_benchmarks with optional benchmark_output_path

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• Fix some code smells

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• Use ctapipe.compat.COPY_IF_NEEDED

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• Add test for cut optimization tool

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• Add test for irf tool

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• Calculate full-enclosure irf by default with optional point-like flag

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• Remove old todo

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• Merge OptimizationResult and OptimizationResultStore

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• Fix some docstrings

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• Support for only using proton and gamma files

  

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• Fix tests for pyirf as optional dependency; update ctapipe-info

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• Fix irf tool for only proton file; remove refs to visualization code in docs

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• Improve handling of only protons as bkg and add tests

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• Remove option of only calculating gh cuts with cut-opt tool, but keep possibility to save an OptimizationResult with only gh cuts for now.

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• energy_migration_linear_bins -> energy_migration_binning

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• Fix docs

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