Remove use of deprecated Mambaforge from Github workflow #1547
langmmtest-install.yml
on: push
Prepare test parameters
0s
Build the Docs
15m 31s
Matrix: test_conda
Matrix: test_pip
Matrix: test_rmq_conda
Matrix: test_rmq_pip
Matrix: test_stripped
Matrix: build_wheels
Build and Publish Docker images
0s
Update the schema used by the model submission form
0s
Upload wheels
0s
Upload sdist
0s
Annotations
61 errors and 32 warnings
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Test stripped install (std, windows, pip)
no artifacts found
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Test stripped install (std, windows, pip)
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Test (3.9, ubuntu, conda, long-remote-service, examples-sbml), Install C = true
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Test (std, windows, conda, long-mpi, examples-backwards), Install C = true
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Test (std, windows, conda, long-mpi, examples-backwards), Install C = true
no artifacts found
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Test (std, windows, conda, long-mpi, examples-backwards), Install C = true
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Test (std, windows, pip, long, empty), Install C = false
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Test (std, windows, pip, long, empty), Install C = false
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Test (std, windows, pip, examples, empty), Install C = true
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Test (std, windows, pip, examples, empty), Install C = true
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Test (std, windows, pip, types-no-c, empty), Install C = true
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Test (std, windows, pip, types-no-c, empty), Install C = true
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Test (std, ubuntu, pip, types-no-c, empty), Install C = true
no artifacts found
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Test RMQ (std, ubuntu, pip)
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Test RMQ (std, ubuntu, pip)
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Test RMQ (std, ubuntu, pip)
no artifacts found
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Test stripped install (std, macos, pip)
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Test stripped install (std, macos, pip)
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Test stripped install (std, macos, pip)
no artifacts found
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Test (std, windows, pip, types-c, empty), Install C = true
no artifacts found
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Test (std, windows, pip, types-c, empty), Install C = true
Process completed with exit code 1.
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Test stripped install (std, ubuntu, pip)
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Test stripped install (std, ubuntu, pip)
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Test stripped install (std, ubuntu, pip)
no artifacts found
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Test (std, windows, pip, basic, empty), Install C = true
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Test (std, windows, pip, basic, empty), Install C = true
no artifacts found
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Test RMQ (std, ubuntu, conda)
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Test RMQ (std, ubuntu, conda)
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Test RMQ (std, ubuntu, conda)
no artifacts found
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Test (std, ubuntu, pip, types-c, empty), Install C = true
no artifacts found
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Test (std, ubuntu, pip, examples, empty), Install C = true
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Test (std, ubuntu, pip, examples, empty), Install C = true
no artifacts found
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Test (std, macos, pip, types-no-c, empty), Install C = true
no artifacts found
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Test (3.10, ubuntu, conda, long, empty), Install C = true
no artifacts found
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Test (3.10, ubuntu, conda, long, empty), Install C = true
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Test (3.10, ubuntu, conda, long, empty), Install C = true
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Test (3.11, ubuntu, conda, long, empty), Install C = true
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Test (3.11, ubuntu, conda, long, empty), Install C = true
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Test (3.11, ubuntu, conda, long, empty), Install C = true
no artifacts found
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Test (3.7, ubuntu, conda, long, empty), Install C = true
Process completed with exit code 1.
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Test (3.7, ubuntu, conda, long, empty), Install C = true
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Test (3.7, ubuntu, conda, long, empty), Install C = true
no artifacts found
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Test (std, ubuntu, pip, basic, empty), Install C = true
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Test (std, ubuntu, pip, basic, empty), Install C = true
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Test (std, ubuntu, pip, basic, empty), Install C = true
no artifacts found
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Test (std, macos, pip, types-c, empty), Install C = true
no artifacts found
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Test (std, ubuntu, conda, long-mpi, examples-backwards), Install C = true
Process completed with exit code 1.
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Test (std, ubuntu, conda, long-mpi, examples-backwards), Install C = true
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Test (std, ubuntu, conda, long-mpi, examples-backwards), Install C = true
no artifacts found
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Test (3.8, macos, conda, examples-rpc-lesson3, tools), Install C = true
Process completed with exit code 1.
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Test (3.8, macos, conda, examples-rpc-lesson3, tools), Install C = true
no artifacts found
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Test (3.8, macos, conda, examples-rpc-lesson3, tools), Install C = true
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Test (std, macos, pip, examples, empty), Install C = true
no artifacts found
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Test (std, macos, pip, examples, empty), Install C = true
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Test (std, macos, pip, basic, empty), Install C = true
no artifacts found
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Test (std, macos, pip, basic, empty), Install C = true
Process completed with exit code 1.
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Test (std, macos, pip, basic, empty), Install C = true
Process completed with exit code 1.
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Test (std, macos, conda, long-mpi, examples-backwards), Install C = true
no artifacts found
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Test (std, macos, conda, long-mpi, examples-backwards), Install C = true
The action 'Run tests (1st)' has timed out after 180 minutes.
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Test (std, macos, conda, long-mpi, examples-backwards), Install C = true
Process completed with exit code 1.
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Test (3.9, ubuntu, conda, long-remote-service, examples-sbml), Install C = true
/home/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:201: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
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Test (3.9, ubuntu, conda, long-remote-service, examples-sbml), Install C = true
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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Test (std, windows, conda, long-mpi, examples-backwards), Install C = true
C:\Users\runneradmin\miniconda3\Lib\site-packages\conda\base\context.py:201: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
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Test (std, windows, conda, long-mpi, examples-backwards), Install C = true
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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Test stripped install (std, macos, pip)
Treating cmake as a formula. For the cask, use homebrew/cask/cmake or specify the `--cask` flag. To silence this message, use the `--formula` flag.
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Test stripped install (std, macos, pip)
cmake 3.31.4 is already installed and up-to-date.
To reinstall 3.31.4, run:
brew reinstall cmake
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Test stripped install (std, macos, pip)
Treating cmake as a formula. For the cask, use homebrew/cask/cmake or specify the `--cask` flag. To silence this message, use the `--formula` flag.
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Test stripped install (std, macos, pip)
cmake 3.31.4 is already installed and up-to-date.
To reinstall 3.31.4, run:
brew reinstall cmake
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Test RMQ (std, ubuntu, conda)
/home/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:201: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
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Test RMQ (std, ubuntu, conda)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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Test (std, macos, pip, types-no-c, empty), Install C = true
gcc 14.2.0_1 is already installed and up-to-date.
To reinstall 14.2.0_1, run:
brew reinstall gcc
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Test (3.10, ubuntu, conda, long, empty), Install C = true
/home/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:201: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
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Test (3.10, ubuntu, conda, long, empty), Install C = true
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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Test (3.11, ubuntu, conda, long, empty), Install C = true
/home/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:201: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
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Test (3.11, ubuntu, conda, long, empty), Install C = true
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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Test (3.7, ubuntu, conda, long, empty), Install C = true
/home/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:201: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
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Test (3.7, ubuntu, conda, long, empty), Install C = true
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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Test (std, macos, pip, types-c, empty), Install C = true
gcc 14.2.0_1 is already installed and up-to-date.
To reinstall 14.2.0_1, run:
brew reinstall gcc
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Test (std, ubuntu, conda, long-mpi, examples-backwards), Install C = true
/home/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:201: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
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Test (std, ubuntu, conda, long-mpi, examples-backwards), Install C = true
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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Test (3.8, macos, conda, examples-rpc-lesson3, tools), Install C = true
/Users/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:201: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
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Test (3.8, macos, conda, examples-rpc-lesson3, tools), Install C = true
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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Test (std, macos, pip, examples, empty), Install C = true
gcc 14.2.0_1 is already installed and up-to-date.
To reinstall 14.2.0_1, run:
brew reinstall gcc
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Test (std, macos, pip, basic, empty), Install C = true
gcc 14.2.0_1 is already installed and up-to-date.
To reinstall 14.2.0_1, run:
brew reinstall gcc
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Test (std, macos, pip, basic, empty), Install C = true
Treating cmake as a formula. For the cask, use homebrew/cask/cmake or specify the `--cask` flag. To silence this message, use the `--formula` flag.
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Test (std, macos, pip, basic, empty), Install C = true
cmake 3.31.4 is already installed and up-to-date.
To reinstall 3.31.4, run:
brew reinstall cmake
|
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Test (std, macos, pip, basic, empty), Install C = true
No available formula with the name "sundials>=5.7.0". Did you mean sundials?
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Test (std, macos, pip, basic, empty), Install C = true
Treating cmake as a formula. For the cask, use homebrew/cask/cmake or specify the `--cask` flag. To silence this message, use the `--formula` flag.
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Test (std, macos, pip, basic, empty), Install C = true
cmake 3.31.4 is already installed and up-to-date.
To reinstall 3.31.4, run:
brew reinstall cmake
|
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Test (std, macos, pip, basic, empty), Install C = true
No available formula with the name "sundials>=5.7.0". Did you mean sundials?
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Test (std, macos, conda, long-mpi, examples-backwards), Install C = true
/Users/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:201: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
|
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Test (std, macos, conda, long-mpi, examples-backwards), Install C = true
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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Artifacts
Produced during runtime
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environment-log-Linux-pip-pystd-C1-RMQ0-examples-empty
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2.38 KB |
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environment-log-Linux-pip-pystd-C1-RMQ0-types-c-empty
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2.38 KB |
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environment-log-Linux-pip-pystd-C1-RMQ0-types-no-c-empty
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2.38 KB |
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environment-log-macOS-pip-pystd-C1-RMQ0-examples-empty
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1.06 KB |
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environment-log-macOS-pip-pystd-C1-RMQ0-types-c-empty
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1.06 KB |
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environment-log-macOS-pip-pystd-C1-RMQ0-types-no-c-empty
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1.06 KB |
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