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Bioimageio Model Creation#227

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anwai98 wants to merge 24 commits intodevcomputational-cell-analytics/micro-sam:devfrom aa-modelzoocomputational-cell-analytics/micro-sam:aa-modelzooCopy head branch name to clipboard

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Commits on Oct 10, 2023

• WIP Add bioimage.io model creation

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  f2fa218

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Commits on Oct 11, 2023

• Update model building script

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• Update model predictor adaptor for bioimage models

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• Refactor modelzoo functionality into submodule

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• Add first working scripts for bioengine export

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• Add input prompt transofrms to adaptor

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• Update numpy input saving

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  b869a33

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• Update bioengine export script

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• Merge branch 'aa-modelzoo' of https://github.com/computational-cell-analytics/micro-sam into aa-modelzoo

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Commits on Oct 12, 2023

• Refactor modelzoo export

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• Add tempfile for model conversion inputs

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• Add doc-strings to bioengine export functionality

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  de6b245

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• Update modelzoo export script

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Commits on Oct 13, 2023

• Update url in imjoy test

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Commits on Mar 14, 2024

• Merge branch 'dev' into aa-modelzoo

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  b28c885

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• Update to bioimageio.spec v0.5 WIP

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Commits on Mar 15, 2024

• Update example script

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Commits on Mar 18, 2024

• Update bioimageio export

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  b9df849

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Commits on Mar 19, 2024

• Minor fixes

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  d911392

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• Work on export

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Commits on Mar 20, 2024

• More modelzoo updtes

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  2d9c88a

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Commits on Mar 21, 2024

• Add all possible model inputs

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Commits on Apr 9, 2024

• Merge branch 'dev' into aa-modelzoo

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  d2e4909

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• Bioimageio updates WIP

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