nanoView

Data Visualization tool for nanopore sequencing data.

Prerequisites

• NPM & NodeJS.
  • Standard NodeJS executable is named as nodejs, which needs to be linked to another file named node which is recognized by this program. It can be done using the command ln -s /path/to/nodejs /path/to/node.

Installation

$ git clone https://github.com/coadunate/nanoView.git
$ cd nanoView
$ npm install
$ npm run build

Deployment

• Before running the application, the API needs to be deployed which generates the data for the visualization. Make sure that you are in nanoView directory.

$ python3 ./nanopore-api/app.py

• Run the following command to serve the application on http-server

$ npm run http-server

Then open http://127.0.0.1:8080/examples/ in your browser of choice (preferably Chrome).

API

Write about the function of API in this program and how it can be used.