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import os | ||
from mind_reading_package import mind_reading as mr | ||
import pandas as pd | ||
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# list all folders' name | ||
participants = os.listdir('path') | ||
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# remove the 'cha' folder we don't need | ||
participants = participants.remove('cha') | ||
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# create the initial dataframe | ||
df = pd.DataFrame(index=['SVC', 'DTC', 'NB', 'NN']) | ||
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for participant in participants: | ||
# iterate all the folders | ||
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for file in os.listdir(participant): | ||
# iterate all files in every folder, find out the one end with 'Cong.csv' and 'Incong.csv' as input data | ||
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if file.endswith('Cong.csv'): | ||
file1 = f"{participant}/{file}" | ||
if file.endswith('Incong.csv'): | ||
file2 = f"{participant}/{file}" | ||
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# load in cong and incong data for them | ||
df1 = mr.load_data(file1) | ||
df2 = mr.load_data(file2) | ||
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# concatenate such data | ||
data = mr.concatenate_data(df1, df2) | ||
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# find trials to later separate | ||
trials_index = mr.find_trials(data) | ||
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# separate trials | ||
trials = mr.separate_trials(data, trials_index) | ||
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# create the label column | ||
labels = mr.create_ic_labels(data) | ||
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# Go through each trial, reset the columns, we split from 100-300ms ((308th sample to 513th sample)) | ||
pro_trials = mr.process_trials(trials, 250, 550) | ||
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# Find the mean across channels | ||
avg_trials = mr.average_trials(pro_trials) | ||
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# concatenates the average trials dataframe with labels | ||
ml_df = mr.create_ml_df(avg_trials, labels) | ||
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# train models | ||
X_train, X_test, y_train, y_test = mr.prepare_ml_df(ml_df) | ||
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acc_svc, precision_svc = mr.train_svc(X_train, X_test, y_train, y_test) | ||
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acc_dtc, precision_dtc = mr.train_dtc(X_train, X_test, y_train, y_test) | ||
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acc_nb, precision_nb = mr.train_nb(X_train, X_test, y_train, y_test) | ||
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acc_nn, precision_nn = mr.train_nn(64, X_train, X_test, y_train, y_test) | ||
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# add every participant's accuracy together | ||
acc_list = [f"{acc_svc:.2f}", f"{acc_dtc:.2f}", | ||
f"{acc_nb:.2f}", f"{acc_nn:.2f}"] | ||
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df = mr.res_df(df, acc_list, participant) | ||
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# generate result .csv file | ||
df.to_csv('cong_incong_accuracy.csv') |
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import os | ||
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print(os.listdir()) |