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Change pinned version for short-read-mngs, which is stuck in python 3.6
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lvreynoso committed May 21, 2024
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2 changes: 1 addition & 1 deletion workflows/short-read-mngs/Dockerfile
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Expand Up @@ -78,7 +78,7 @@ RUN apt-get -q install -y \
spades \
ncbi-blast+

RUN pip3 install boto3==1.23.10 marisa-trie==0.7.7 pytest requests==2.31.0
RUN pip3 install boto3==1.23.10 marisa-trie==0.7.7 pytest requests==2.27.1
RUN pip3 install miniwdl==${MINIWDL_VERSION} miniwdl-s3parcp==0.0.5 miniwdl-s3upload==0.0.4
RUN pip3 install https://github.com/chanzuckerberg/miniwdl-plugins/archive/f0465b0.zip#subdirectory=sfn-wdl
RUN pip3 install https://github.com/chanzuckerberg/s3mi/archive/v0.8.0.tar.gz
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