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23 Open 5 Closed
23 Open 5 Closed
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Issues list

Add pytest-cov to test coverage of the generated Python classes
#46 opened Dec 9, 2021 by gaurav
Remove direct link to CRDCH schema
#45 opened Dec 9, 2021 by gaurav
Fix bugs in automated GDC to CRDCH transformation script
#40 opened Nov 18, 2021 by gaurav
6 tasks
Uncomment non-validating data from the CCDH Pilot examples and fix CRDCH model so that they work correctly
#39 opened Nov 18, 2021 by gaurav
13 tasks
1
Rename example-data repo to something more self explanatory? question Further information is requested
#38 opened Nov 17, 2021 by sujaypatil96
@gaurav @sujaypatil96
5
Conversion examples for Clinical Trials Data Commons?
#36 opened Nov 10, 2021 by turbomam Future goals
2
Tools team's responsibility for secure computing and Authority to Operate?
#35 opened Nov 10, 2021 by turbomam Future goals
1
Implement example mapping activities as APIs
#34 opened Nov 10, 2021 by turbomam
1
Ongoing discussion about where to find mappings for terms as well as values
#31 opened Nov 10, 2021 by turbomam
4
Try out JSON-based methods for recording provenance
#30 opened Nov 2, 2021 by gaurav Develop a method for maintaining provenance during metadata transformations (Phase 3, Quarter 1, 2022)
1
Think about removing spaces from filenames in this repo
#29 opened Oct 28, 2021 by gaurav Future goals
update notebooks: switch from enums to codable concepts
#27 opened Oct 21, 2021 by turbomam Build a complete Example Data workflow (Phase 3, Quarter 4, 2021)
@turbomam
5
Update Jupyter Notebooks to use crdch_model from Pipfile
#25 opened Oct 11, 2021 by gaurav Build a complete Example Data workflow (Phase 3, Quarter 4, 2021)
1
Cannot install pandas on my computer: odd numpy error
#23 opened Oct 10, 2021 by gaurav Build a complete Example Data workflow (Phase 3, Quarter 4, 2021)
@gaurav
1
Document a flow for new use cases to be proposed and developed
#19 opened Sep 3, 2021 by gaurav Make the Example Data repo easier to navigate and use
Integrate Jupyter Notebooks into automated testing enhancement New feature or request
#18 opened Sep 3, 2021 by gaurav Build a complete Example Data workflow (Phase 3, Quarter 4, 2021)
Add code and data to query multiple nodes and convert the resulting data into the CRDCH model
#16 opened Aug 4, 2021 by gaurav Demonstrate harmonization from multiple nodes (Phase 3, Quarter 4, 2021)
Add @type to the JSON-LD output bug Something isn't working good first issue Good for newcomers
#15 opened Jul 29, 2021 by gaurav Demonstrate harmonization of multiple CRDCH entities (Phase 3, Quarter 4, 2021)
1
Add a LICENSE file to this repository good first issue Good for newcomers
#12 opened Jul 9, 2021 by gaurav Build a complete Example Data workflow (Phase 3, Quarter 4, 2021)
1
Create example CRDC-H files in several formats and ensure that they can be validated
#10 opened Jul 6, 2021 by gaurav Build a complete Example Data workflow (Phase 3, Quarter 4, 2021)
Add PDC import and show how the CCDH model can be used to synthesize data between GDC and PDC use case A use case that needs to be added to the Example Data Workflow
#9 opened Jul 6, 2021 by gaurav
3 tasks
Demonstrate harmonization from multiple nodes (Phase 3, Quarter 4, 2021)
Add support for extracting the full sample/portion/analyte hierarchy from GDC good first issue Good for newcomers use case A use case that needs to be added to the Example Data Workflow
#6 opened May 31, 2021 by gaurav Demonstrate harmonization of multiple CRDCH entities (Phase 3, Quarter 4, 2021)
Add support for additional Jupyter Notebook tools
#5 opened Apr 29, 2021 by gaurav
1 of 2 tasks
Make the Example Data repo easier to navigate and use
1
ProTip! What’s not been updated in a month: updated:<2024-12-23.