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non-existent package?
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dpark01 committed Dec 8, 2023
1 parent 6370e1a commit 0466392
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2 changes: 1 addition & 1 deletion Dockerfile
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Expand Up @@ -33,7 +33,7 @@ RUN locale-gen en_US.UTF-8
ENV LANG="en_US.UTF-8" LANGUAGE="en_US:en" LC_ALL="en_US.UTF-8"

# Install necessary R dependencies
RUN R -e "for (lib in c( 'tidyverse', 'extraDistr', 'istr', 'LaplacesDemon', 'ade4', 'kmer', 'phylogram', 'aphid', 'insect' )) { install.packages(lib, dependencies=TRUE); library(lib, character.only=TRUE) }"
RUN R -e "for (lib in c( 'tidyverse', 'extraDistr', 'LaplacesDemon', 'ade4', 'kmer', 'phylogram', 'aphid', 'insect' )) { install.packages(lib, dependencies=TRUE); library(lib, character.only=TRUE) }"
RUN R -e "devtools::install_github('RfastOfficial/Rfast', dependencies=TRUE); library(Rfast)"

# Install reconstructR R package -- invalidate cache any time github main branch updates
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