Merge branch 'master' into mech-graph

broadinstitute · Nov 20, 2024 · 9b760fd · 9b760fd
2 parents c36ec86 + ade8027
commit 9b760fd
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Showing 2 changed files with 6 additions and 4 deletions.
diff --git a/src/components/PigeanTable.vue b/src/components/PigeanTable.vue
@@ -6,6 +6,7 @@ import DataDownload from "@/components/DataDownload.vue";
 import keyParams from "@/utils/keyParams";
 import PigeanTable from "./PigeanTable.vue";
 import ResearchPheWAS from "@/components/researchPortal/ResearchPheWAS.vue";
+import { DEFAULT_SIGMA } from "@/utils/bioIndexUtils";
 import uiUtils from "@/utils/uiUtils";
 import alertUtils from "@/utils/alertUtils";
 import plotUtils from "@/utils/plotUtils";
@@ -166,14 +167,14 @@ export default Vue.component("pigean-table", {
             }
         },
         phewasKey(item) {
-            return `${item.phenotype},${this.genesetSize},${this.traitGroup},${item.factor}`;
+            return `${item.phenotype},${DEFAULT_SIGMA},${this.genesetSize},${item.factor}`;
         },
         subtableKey(item) {
             if (this.config.queryParam === "cluster") {
-                return `${item.phenotype},${this.genesetSize},${this.traitGroup},${item.factor}`;
+                return `${item.phenotype},${DEFAULT_SIGMA},${this.genesetSize},${item.factor}`;
             }
             return `${item.phenotype},${item[this.config.queryParam]},${
-                this.genesetSize},${this.traitGroup}`;
+                DEFAULT_SIGMA},${this.genesetSize}`;
         },
         generateId(label) {
             return label.replaceAll(",", "").replaceAll(" ", "_");

diff --git a/src/views/PIGEAN/Gene/store.js b/src/views/PIGEAN/Gene/store.js
@@ -83,7 +83,8 @@ export default new Vuex.Store({
             if (!!name) {
                 context.dispatch("gene/query", { q: name });
                 context.dispatch("pigeanGene/query", { q: 
-                    `${traitGroup},${name},${bioIndexUtils.DEFAULT_SIGMA},${genesetSize}` });
+                    `${traitGroup},${name},${bioIndexUtils.DEFAULT_SIGMA},${genesetSize}`,
+                    limit: 1000 });
             }
         },
         async getPigeanPhenotypes(context) {