Add prefixes to categories in examples

bridge2ai · Dec 17, 2024 · b9e2ae7 · b9e2ae7
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Showing 8 changed files with 15 additions and 15 deletions.
diff --git a/src/data/valid-examples/DataStandardOrToolContainer-minimal-1.yaml b/src/data/valid-examples/DataStandardOrToolContainer-minimal-1.yaml
@@ -1,3 +1,3 @@
 data_standardortools_collection:
   - id: B2AI_STANDARD:1
-  - id: B2AI_STANDARD:2
+  - id: B2AI_STANDARD:2
diff --git a/src/data/valid-examples/DataSubstrate-valid-1.yaml b/src/data/valid-examples/DataSubstrate-valid-1.yaml
@@ -1,7 +1,7 @@
 # Example DataSubstrate data
 id: B2AI_SUBSTRATE:53
 name: BED
-category: DataSubstrate
+category: B2AI_SUBSTRATE:DataSubstrate
 subclass_of:
   - B2AI_SUBSTRATE:1
 description: BED (Browser Extensible Data) format provides a flexible way to define the data lines that are displayed in a genome annotation track.
@@ -12,4 +12,4 @@ metadata_storage:
 
 contributor_name: "Kiran Neelam"
 contributor_orcid: ORCID:0000-0001-1276-5602
-contribution_date: "2023-02-02"
+contribution_date: "2023-02-02"
diff --git a/src/data/valid-examples/DataSubstrateContainer-minimal-1.yaml b/src/data/valid-examples/DataSubstrateContainer-minimal-1.yaml
@@ -1,3 +1,3 @@
 data_substrates_collection:
   - id: B2AI_SUBSTRATE:1
-  - id: B2AI_SUBSTRATE:2
+  - id: B2AI_SUBSTRATE:2
diff --git a/src/data/valid-examples/DataTopic-valid-1.yaml b/src/data/valid-examples/DataTopic-valid-1.yaml
@@ -2,7 +2,7 @@
 
 id: B2AI_TOPIC:2
 name: Biology
-category: DataTopic
+category: B2AI_TOPIC:DataTopic
 subclass_of:
   - B2AI_TOPIC:1
 description: Data involving any study of living organisms at any scale.
@@ -11,4 +11,4 @@ mesh_id: mesh:D001695
 ncit_id: ncit:C16345
 contributor_name: "Pitsiulaaq Mtendere"
 contributor_orcid: ORCID:0000-0002-1245-5763
-contribution_date: "2023-04-04"
+contribution_date: "2023-04-04"
diff --git a/src/data/valid-examples/DataTopic-valid-2.yaml b/src/data/valid-examples/DataTopic-valid-2.yaml
@@ -3,16 +3,16 @@
 id: B2AI_TOPIC:22
 name: Neurologic Imaging
 subclass_of:
-- B2AI_TOPIC:15
+  - B2AI_TOPIC:15
 edam_id: edam.data:3424
 mesh_id: mesh:D059906
 ncit_id: ncit:C173635
-category: DataTopic
+category: B2AI_TOPIC:DataTopic
 description: Images obtained through one or more brain imaging techniques, including
   computed tomography, positron emission tomography, magnetic resonance imaging,
   or imaging of associated body structures (e.g., angiography).
 topic_involves_anatomy:
-- uberon:0000955
+  - uberon:0000955
 contributor_name: Laverne Billie
 contributor_github_name: laverne
-contributor_orcid: ORCID:0000-0001-5555-7811
+contributor_orcid: ORCID:0000-0001-5555-7811
diff --git a/src/data/valid-examples/Organization-1.yaml b/src/data/valid-examples/Organization-1.yaml
@@ -2,7 +2,7 @@
 
 id: B2AI_ORG:1
 name: AHRQ
-category: Organization
+category: B2AI_ORGANIZATION:Organization
 subclass_of:
   - B2AI_ORG:2
 description: US Agency for Healthcare Research and Quality
@@ -11,4 +11,4 @@ wikidata_id: wikidata:Q4692008
 url: https://www.ahrq.gov/
 contributor_name: "Radha Chris"
 contributor_orcid: ORCID:0000-0005-1555-5773
-contribution_date: "2023-05-05"
+contribution_date: "2023-05-05"
diff --git a/src/data/valid-examples/OrganizationContainer-minimal-1.yaml b/src/data/valid-examples/OrganizationContainer-minimal-1.yaml
@@ -1,3 +1,3 @@
 organizations:
   - id: B2AI_ORG:1
-  - id: B2AI_ORG:2
+  - id: B2AI_ORG:2
diff --git a/src/data/valid-examples/UseCase-valid-1.yaml b/src/data/valid-examples/UseCase-valid-1.yaml
@@ -4,7 +4,7 @@ id: B2AI_USECASE:1
 use_case_category:
   - acquisition
 name: Obtain patient data from records of clinical visits.
-category: UseCase
+category: B2AI_USECASE:UseCase
 description: "Collecting clinical data from patient visits involves the process of gathering information about a patient's medical history, current symptoms, and other relevant information during a healthcare appointment. This typically includes taking a detailed medical history, conducting a physical examination, ordering and interpreting diagnostic tests, and documenting the findings in the patient's medical record. This may also include more focused evaluations, as with the AI-READI project’s assessments of cognitive function and visual acuity. Medical records may include structured/unstructured text, values for lab results, and/or images."
 
 alternative_standards_and_tools:
@@ -49,4 +49,4 @@ enables:
 
 contributor_name: "Sashi Wattana"
 contributor_orcid: ORCID:0000-0001-1234-5678
-contribution_date: "2023-01-01"
+contribution_date: "2023-01-01"