Name		Name	Last commit message	Last commit date
Latest commit History 42 Commits
Allele.C		Allele.C
Allele.H		Allele.H
ConnectedComponent.C		ConnectedComponent.C
ConnectedComponent.H		ConnectedComponent.H
LICENSE		LICENSE
Phase.C		Phase.C
Phase.H		Phase.H
README.md		README.md
ReadPairManager.C		ReadPairManager.C
ReadPairManager.H		ReadPairManager.H
ReadVariants.C		ReadVariants.C
ReadVariants.H		ReadVariants.H
SamReader.C		SamReader.C
SamReader.H		SamReader.H
SamRecord.C		SamRecord.C
SamRecord.H		SamRecord.H
SamTabix.C		SamTabix.C
SamTabix.H		SamTabix.H
Variant.C		Variant.C
Variant.H		Variant.H
VariantGraph.C		VariantGraph.C
VariantGraph.H		VariantGraph.H
VariantInRead.C		VariantInRead.C
VariantInRead.H		VariantInRead.H
VcfStream.C		VcfStream.C
VcfStream.H		VcfStream.H
count-combinations-in-fragments.C		count-combinations-in-fragments.C
count-isoform-variants.C		count-isoform-variants.C
fig1c.py		fig1c.py
fig1d.py		fig1d.py
fig1e.py		fig1e.py
makefile		makefile
phd.C		phd.C
sort-gff.C		sort-gff.C
split-gff.py		split-gff.py
split-sam.C		split-sam.C
split-vcf.C		split-vcf.C
subset-vcf-by-samples.C		subset-vcf-by-samples.C

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