Replace the cdn url with cdn.biovis.report.

biovis-report · May 27, 2022 · 055b696 · 055b696
1 parent f640efa
commit 055b696
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Showing 17 changed files with 33 additions and 31 deletions.
diff --git a/MANIFEST.in b/MANIFEST.in
@@ -5,4 +5,5 @@ recursive-include * *
 recursive-exclude * __pycache__
 recursive-exclude * *.pyc
 recursive-exclude * *.pyo
-recursive-exclude *.egg-info *
+recursive-exclude *.egg-info *
+recursive-exclude .git *
diff --git a/barplot/barplot-r/ui.R b/barplot/barplot-r/ui.R
@@ -19,7 +19,7 @@ shinyUI(fluidPage(
       #showpanel {width: 120px; margin-bottom: 10px; background-color: #f5f5f5; box-shadow: none;}
       .shiny-spinner-output-container {width: 100%;}
     "),
-    tags$script(src="http://nordata-cdn.oss-cn-shanghai.aliyuncs.com/biovis-report/2019-02-27-iframeResizer.contentWindow.min.js",
+    tags$script(src="https://cdn.biovis.report/assets/2019-02-27-iframeResizer.contentWindow.min.js",
                 type="text/javascript")
   ),
   sidebarLayout(

diff --git a/boxplot/boxplot-r/ui.R b/boxplot/boxplot-r/ui.R
@@ -16,7 +16,7 @@ shinyUI(fluidPage(
       #main {display: flex; flex-direction: column; align-items: flex-end;}
       #showpanel {width: 120px; margin-bottom: 10px; background-color: #f5f5f5; box-shadow: none;}
     "),
-    tags$script(src="http://nordata-cdn.oss-cn-shanghai.aliyuncs.com/biovis-report/2019-02-27-iframeResizer.contentWindow.min.js",
+    tags$script(src="http://cdn.biovis.report/assets/2019-02-27-iframeResizer.contentWindow.min.js",
                 type="text/javascript")
   ),
   sidebarLayout(

diff --git a/conda.recipe/meta.yaml b/conda.recipe/meta.yaml
@@ -20,6 +20,7 @@ requirements:
 
   run:
     - python {{ python }}
+    - biovis-report ~=0.5
     - r-dplyr
     - r-shiny
     - r-plotly
@@ -43,20 +44,20 @@ requirements:
 
 test:
   imports:
-    - barplot.barplot:BarPlotRPlugin
-    - boxplot.boxplot:BoxPlotRPlugin
-    - corrplot.corrplot:CorrPlotRPlugin
-    - density_plot.density_plot:DensityPlotRPlugin
-    - grouped_boxplot.grouped_boxplot:GroupedBoxPlotRPlugin
-    - heatmap_r.heatmap:HeatmapRPlugin
-    - heatmap_d3.heatmap:HeatmapD3RPlugin
-    - lineplot.lineplot:LinePlotRPlugin
-    - lollipop_plot.lollipop_plot:LollipopPlotRPlugin
-    - rocket_plot.rocket_plot:RocketPlotRPlugin
-    - scatter_plot.scatter_plot:ScatterPlotRPlugin
-    - stack_barplot.stack_barplot:StackBarPlotRPlugin
-    - upset.upset:UpsetRPlugin
-    - violin_plot.violin_plot:ViolinPlotRPlugin
+    - barplot.barplot
+    - boxplot.boxplot
+    - corrplot.corrplot
+    - density_plot.density_plot
+    - grouped_boxplot.grouped_boxplot
+    - heatmap.heatmap
+    - heatmap_d3.heatmap
+    - lineplot.lineplot
+    - lollipop_plot.lollipop_plot
+    - rocket_plot.rocket_plot
+    - scatter_plot.scatter_plot
+    - stack_barplot.stack_barplot
+    - upset.upset
+    - violin_plot.violin_plot
 
 about:
   home: {{ data.url }}

diff --git a/corrplot/corrplot-r/ui.R b/corrplot/corrplot-r/ui.R
@@ -17,7 +17,7 @@ shinyUI(fluidPage(
       #main {display: flex; flex-direction: column; align-items: flex-end;}
       #showpanel {width: 120px; margin-bottom: 10px; background-color: #f5f5f5; box-shadow: none;}
     "),
-    tags$script(src="http://nordata-cdn.oss-cn-shanghai.aliyuncs.com/biovis-report/2019-02-27-iframeResizer.contentWindow.min.js",
+    tags$script(src="https://cdn.biovis.report/assets/2019-02-27-iframeResizer.contentWindow.min.js",
                 type="text/javascript")
   ),
   sidebarLayout(

diff --git a/density_plot/density-plot/ui.R b/density_plot/density-plot/ui.R
@@ -17,7 +17,7 @@ shinyUI(fluidPage(
       #main {display: flex; flex-direction: column; align-items: flex-end;}
       #showpanel {width: 120px; margin-bottom: 10px; background-color: #f5f5f5; box-shadow: none;}
     "),
-    tags$script(src="http://nordata-cdn.oss-cn-shanghai.aliyuncs.com/biovis-report/2019-02-27-iframeResizer.contentWindow.min.js",
+    tags$script(src="https://cdn.biovis.report/assets/2019-02-27-iframeResizer.contentWindow.min.js",
                 type="text/javascript")
   ),
   sidebarLayout(

diff --git a/grouped_boxplot/grouped-boxplot-r/ui.R b/grouped_boxplot/grouped-boxplot-r/ui.R
@@ -16,7 +16,7 @@ shinyUI(fluidPage(
       #main {display: flex; flex-direction: column; align-items: flex-end;}
       #showpanel {width: 120px; margin-bottom: 10px; background-color: #f5f5f5; box-shadow: none;}
     "),
-    tags$script(src="http://nordata-cdn.oss-cn-shanghai.aliyuncs.com/biovis-report/2019-02-27-iframeResizer.contentWindow.min.js",
+    tags$script(src="https://cdn.biovis.report/assets/2019-02-27-iframeResizer.contentWindow.min.js",
                 type="text/javascript")
   ),
   sidebarLayout(

diff --git a/heatmap/heatmap-r/ui.R b/heatmap/heatmap-r/ui.R
@@ -18,7 +18,7 @@ shinyUI(fluidPage(
       #main {display: flex; flex-direction: column; align-items: flex-end;}
       #showpanel {width: 120px; margin-bottom: 10px; background-color: #f5f5f5; box-shadow: none;}  
     "),
-    tags$script(src="http://nordata-cdn.oss-cn-shanghai.aliyuncs.com/biovis-report/2019-02-27-iframeResizer.contentWindow.min.js",
+    tags$script(src="https://cdn.biovis.report/assets/2019-02-27-iframeResizer.contentWindow.min.js",
                 type="text/javascript")
   ),
   sidebarLayout(

diff --git a/heatmap_d3/heatmap-d3-r/ui.R b/heatmap_d3/heatmap-d3-r/ui.R
@@ -16,7 +16,7 @@ shinyUI(fluidPage(
       #main {display: flex; flex-direction: column; align-items: flex-end;}
       #showpanel {width: 120px; margin-bottom: 10px; background-color: #f5f5f5; box-shadow: none;}
     "),
-    tags$script(src="http://nordata-cdn.oss-cn-shanghai.aliyuncs.com/biovis-report/2019-02-27-iframeResizer.contentWindow.min.js",
+    tags$script(src="https://cdn.biovis.report/assets/2019-02-27-iframeResizer.contentWindow.min.js",
                 type="text/javascript")
   ),
   sidebarLayout(

diff --git a/lineplot/lineplot-r/ui.R b/lineplot/lineplot-r/ui.R
@@ -17,7 +17,7 @@ shinyUI(fluidPage(
       #main {display: flex; flex-direction: column; align-items: flex-end;}
       #showpanel {width: 120px; margin-bottom: 10px; background-color: #f5f5f5; box-shadow: none}
     "),
-    tags$script(src="http://nordata-cdn.oss-cn-shanghai.aliyuncs.com/biovis-report/2019-02-27-iframeResizer.contentWindow.min.js",
+    tags$script(src="https://cdn.biovis.report/assets/2019-02-27-iframeResizer.contentWindow.min.js",
                 type="text/javascript")
   ),
   sidebarLayout(

diff --git a/lollipop_plot/lollipop-plot-r/ui.R b/lollipop_plot/lollipop-plot-r/ui.R
@@ -18,7 +18,7 @@ shinyUI(fluidPage(
       #main {display: flex; flex-direction: column; align-items: flex-end;}
       #showpanel {width: 120px; margin-bottom: 10px; background-color: #f5f5f5; box-shadow: none}
     "),
-    tags$script(src="http://nordata-cdn.oss-cn-shanghai.aliyuncs.com/biovis-report/2019-02-27-iframeResizer.contentWindow.min.js",
+    tags$script(src="https://cdn.biovis.report/assets/2019-02-27-iframeResizer.contentWindow.min.js",
                 type="text/javascript")
   ),
   sidebarLayout(

diff --git a/rocket_plot/rocket-plot-r/ui.R b/rocket_plot/rocket-plot-r/ui.R
@@ -96,7 +96,7 @@ shinyUI(fluidPage(
         overflow: hidden;
       }
     "),
-    tags$script(src="http://nordata-cdn.oss-cn-shanghai.aliyuncs.com/biovis-report/2019-02-27-iframeResizer.contentWindow.min.js",
+    tags$script(src="https://cdn.biovis.report/assets/2019-02-27-iframeResizer.contentWindow.min.js",
                 type="text/javascript")
   ),
   sidebarLayout(

diff --git a/scatter_plot/scatter-plot-r/ui.R b/scatter_plot/scatter-plot-r/ui.R
@@ -16,7 +16,7 @@ shinyUI(fluidPage(
       #main {display: flex; flex-direction: column; align-items: flex-end;}
       #showpanel {width: 120px; margin-bottom: 10px; background-color: #f5f5f5; box-shadow: none;}
     "),
-    tags$script(src="http://nordata-cdn.oss-cn-shanghai.aliyuncs.com/biovis-report/2019-02-27-iframeResizer.contentWindow.min.js",
+    tags$script(src="https://cdn.biovis.report/assets/2019-02-27-iframeResizer.contentWindow.min.js",
                 type="text/javascript")
   ),
   sidebarLayout(

diff --git a/setup.py b/setup.py
@@ -1,7 +1,7 @@
 from setuptools import setup, find_packages
 
 def get_version():
-    return '0.1.0'
+    return '0.5.0'
 
 setup(
     name='biovis-rbase-plugins',
@@ -37,7 +37,7 @@ def get_version():
             'corrplot-r = corrplot.corrplot:CorrPlotRPlugin',
             'density-plot-r = density_plot.density_plot:DensityPlotRPlugin',
             'grouped-boxplot-r = grouped_boxplot.grouped_boxplot:GroupedBoxPlotRPlugin',
-            'heatmap-r = heatmap_r.heatmap:HeatmapRPlugin',
+            'heatmap-r = heatmap.heatmap:HeatmapRPlugin',
             'heatmap-d3-r = heatmap_d3.heatmap:HeatmapD3RPlugin',
             'lineplot-r = lineplot.lineplot:LinePlotRPlugin',
             'lollipop-plot-r = lollipop_plot.lollipop_plot:LollipopPlotRPlugin',

diff --git a/stack_barplot/stack-barplot-r/ui.R b/stack_barplot/stack-barplot-r/ui.R
@@ -17,7 +17,7 @@ shinyUI(fluidPage(
       #main {display: flex; flex-direction: column; align-items: flex-end;}
       #showpanel {width: 120px; margin-bottom: 10px; background-color: #f5f5f5; box-shadow: none;}
     "),
-    tags$script(src="http://nordata-cdn.oss-cn-shanghai.aliyuncs.com/biovis-report/2019-02-27-iframeResizer.contentWindow.min.js",
+    tags$script(src="https://cdn.biovis.report/assets/2019-02-27-iframeResizer.contentWindow.min.js",
                 type="text/javascript")
   ),
   sidebarLayout(

diff --git a/upset/upset-r/ui.R b/upset/upset-r/ui.R
@@ -20,7 +20,7 @@ shinyUI(fluidPage(
       #main {display: flex; flex-direction: column; align-items: flex-end;}
       #showpanel {width: 120px; margin-bottom: 10px; background-color: #f5f5f5; box-shadow: none;}  
     "),
-    tags$script(src="http://nordata-cdn.oss-cn-shanghai.aliyuncs.com/biovis-report/2019-02-27-iframeResizer.contentWindow.min.js",
+    tags$script(src="https://cdn.biovis.report/assets/2019-02-27-iframeResizer.contentWindow.min.js",
                 type="text/javascript")
   ),
   sidebarLayout(

diff --git a/violin_plot/violin-plot-r/ui.R b/violin_plot/violin-plot-r/ui.R
@@ -16,7 +16,7 @@ shinyUI(fluidPage(
       #main {display: flex; flex-direction: column; align-items: flex-end;}
       #showpanel {width: 120px; margin-bottom: 10px; background-color: #f5f5f5; violin_-shadow: none;}
     "),
-    tags$script(src="http://nordata-cdn.oss-cn-shanghai.aliyuncs.com/biovis-report/2019-02-27-iframeResizer.contentWindow.min.js",
+    tags$script(src="https://cdn.biovis.report/assets/2019-02-27-iframeResizer.contentWindow.min.js",
                 type="text/javascript")
   ),
   sidebarLayout(