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bettercallsal Public
Forked from CFSAN-Biostatistics/bettercallsalNextflow workflows to assign Salmonella serotype based on Genome similarity using MASH, SOURMASH and KMA.
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cronology Public
Forked from CFSAN-Biostatistics/cronologycronology is an automated workflow for Cronobacter whole genome sequence assembly, subtyping and traceback based on NCBI Pathogen Detection Project for Cronobacter.
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crotrait Public
Forked from happywlu/CroTraitA portable tool for in silico species identification, serotyping and multilocus sequence typing of Cronobacter genus
Python UpdatedAug 31, 2023 -
bioconda-recipes Public
Forked from bioconda/bioconda-recipesConda recipes for the bioconda channel.
Shell MIT License UpdatedAug 31, 2023 -
galaxy-hub Public
Forked from galaxyproject/galaxy-hubGalaxy Community Hub
HTML UpdatedAug 16, 2022 -
fish-peco Public
Forked from takashabe/fish-pecopeco select functions for fish shell
Shell MIT License UpdatedMay 14, 2021 -
SqueezeMeta Public
Forked from jtamames/SqueezeMetaA complete pipeline for metagenomic analysis
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BURST Public
Forked from knights-lab/BURSTAn ultrafast optimal aligner for mapping large NGS data to large genome databases.
C GNU Affero General Public License v3.0 UpdatedApr 30, 2020 -
Perl-for-Bioinformatics Public
An attempt to help anyone interested in using Perl for Bioinformatics
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cpc Public
Working copy of Coding Potential Calculator. Will serve as an archive.
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Rocket.Chat.Integrations Public
Forked from RocketChat/Rocket.Chat.IntegrationsRocket.Chat Integrations
JavaScript UpdatedNov 14, 2017 -
DOQTL Public
Forked from dmgatti/DOQTLQTL mapping for Diversity Outbred mice (and other multi-founder advanced intercrosses)
R UpdatedNov 6, 2017 -
SBEToolbox Public
SBEToolbox (Systems Biology and Evolution Toolbox) is developed in MATLAB as a menu-driven UI software to determine various statistics of the biological network.
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atac_dnase_pipelines Public
Forked from kundajelab/atac_dnase_pipelinesATAC-seq and DNase-seq processing pipeline
Python BSD 3-Clause "New" or "Revised" License UpdatedAug 4, 2017 -
trinityrnaseq Public
Forked from trinityrnaseq/trinityrnaseqTrinity RNA-Seq de novo transcriptome assembly
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vcflib Public
Forked from vcflib/vcfliba simple C++ library for parsing and manipulating VCF files, + many command-line utilities
C++ MIT License UpdatedOct 23, 2014 -
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gff2fasta Public
Forked from minillinim/gff2fastaconvert a gff file into fasta format
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