Dev #101
Dev #101
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WalkthroughThis pull request adds a new CITATION.cff file that contains detailed metadata for the ibaqpy package, including citation instructions, publication details, authors, and an abstract. Additionally, the citation section in README.md has been updated to showcase the new publication citation for ibaqpy and to relocate the previous citation under a separate "Other relevant publications" section. These modifications purely update the documentation and citation information without affecting package functionality. Changes
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Actionable comments posted: 0
🧹 Nitpick comments (1)
README.md (1)
226-226: Format the DOI as a clickable link.The DOI should be formatted as a clickable link for better accessibility.
-bioRxiv 2025.02.08.637208; doi: https://doi.org/10.1101/2025.02.08.637208 +bioRxiv 2025.02.08.637208; doi: [10.1101/2025.02.08.637208](https://doi.org/10.1101/2025.02.08.637208)🧰 Tools
🪛 markdownlint-cli2 (0.17.2)
226-226: Bare URL used
null(MD034, no-bare-urls)
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📒 Files selected for processing (2)
CITATION.cff(1 hunks)README.md(1 hunks)
🧰 Additional context used
🪛 markdownlint-cli2 (0.17.2)
README.md
226-226: Bare URL used
null
(MD034, no-bare-urls)
⏰ Context from checks skipped due to timeout of 90000ms (3)
- GitHub Check: Codacy Static Code Analysis
- GitHub Check: build
- GitHub Check: build
🔇 Additional comments (3)
CITATION.cff (2)
1-29: LGTM! The citation metadata is well-structured.The CITATION.cff file follows the CFF format specification and includes all necessary metadata:
- Version and message
- Title and authors
- Abstract
- Publication details (DOI, URL, journal)
- Release information
24-26: Verify the release date and URL.The release date and URL contain future dates (2025). Since we're in February 2025, this is acceptable, but please ensure:
- The release date matches the actual publication date
- The bioRxiv URL is accessible and contains the correct paper
✅ Verification successful
🏁 Script executed:
#!/bin/bash # Verify the bioRxiv URL is accessible curl -I "https://www.biorxiv.org/content/early/2025/02/08/2025.02.08.637208"Length of output: 1256
Release date and URL verified as valid.
- The release date ("2025-02-08") is appropriate for the current period.
- The bioRxiv URL is accessible; the HTTP 301 redirect to the versioned URL confirms proper protocol handling.
README.md (1)
224-230: LGTM! Citation information is consistent with CITATION.cff.The citation section is well-organized with:
- Primary citation matching CITATION.cff
- Previous citation properly moved to "Other relevant publications"
🧰 Tools
🪛 markdownlint-cli2 (0.17.2)
226-226: Bare URL used
null(MD034, no-bare-urls)
Summary by CodeRabbit
New Features
Documentation