Update peer to compile and work on modern platforms. #17
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| # This starter workflow is for a CMake project running on a single platform. There is a different starter workflow if you need cross-platform coverage. | |
| # See: https://github.com/actions/starter-workflows/blob/main/ci/cmake-multi-platform.yml | |
| name: Package and compile Peer across OSes and archs | |
| on: | |
| push: | |
| branches: [ "master" ] | |
| pull_request: | |
| branches: [ "master" ] | |
| env: | |
| # Customize the CMake build type here (Release, Debug, RelWithDebInfo, etc.) | |
| BUILD_TYPE: Release | |
| jobs: | |
| build: | |
| # The CMake configure and build commands are platform agnostic and should work equally well on Windows or Mac. | |
| # You can convert this to a matrix build if you need cross-platform coverage. | |
| # See: https://docs.github.com/en/free-pro-team@latest/actions/learn-github-actions/managing-complex-workflows#using-a-build-matrix | |
| runs-on: ubuntu-latest | |
| defaults: | |
| run: | |
| shell: bash -el {0} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Setup Miniconda | |
| uses: conda-incubator/[email protected] | |
| with: | |
| mamba-version: "*" | |
| channel-priority: true | |
| activate-environment: peer | |
| environment-file: peer-environment.yml | |
| - name: Configure CMake | |
| # Configure CMake in a 'build' subdirectory. `CMAKE_BUILD_TYPE` is only required if you are using a single-configuration generator such as make. | |
| # See https://cmake.org/cmake/help/latest/variable/CMAKE_BUILD_TYPE.html?highlight=cmake_build_type | |
| run: cmake -B ${{github.workspace}}/build -DCMAKE_BUILD_TYPE=${{env.BUILD_TYPE}} | |
| - name: Build | |
| # Build your program with the given configuration | |
| run: cmake --build ${{github.workspace}}/build --config ${{env.BUILD_TYPE}} | |
| - name: Assemble R source package | |
| run: | | |
| pushd cran | |
| bash create_source_new.sh | |
| popd | |
| - name: Assemble Python source package | |
| run: | | |
| pushd standalone_python | |
| bash create_python_package.sh | |
| popd | |
| - name: Upload artifacts | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: peertool | |
| path: build/src/peertool | |
| - name: Upload artifacts | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: r-python-packages | |
| path: | | |
| cran/peer_*.tar.gz | |
| standalone_python/peer/dist/peer-*.tar.gz | |
| cibuildwheel: | |
| name: Build wheels on ${{ matrix.os }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: [ ubuntu-latest, windows-latest, macos-latest ] | |
| needs: build | |
| steps: | |
| - uses: actions/download-artifact@v4 | |
| with: | |
| name: r-python-packages | |
| - name: cibuildwheel for python | |
| uses: pypa/[email protected] | |
| with: | |
| package-dir: standalone_python/peer/dist/peer-*.tar.gz | |
| env: | |
| CIBW_ARCHS_MACOS: x86_64 aarch64 | |
| - uses: actions/upload-artifact@v4 | |
| with: | |
| name: cibw-wheels-${{ matrix.os }}-${{ strategy.job-index }} | |
| path: ./wheelhouse/*.whl | |
| - name: Set up R | |
| uses: r-lib/actions/setup-r@v2 | |
| - name: Test R on this platform | |
| run: R CMD check --as-cran cran/peer_*.tar.gz |