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edited name of pipeline
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ayoraind committed Mar 17, 2023
1 parent 0a7ddcc commit 6925285
Showing 1 changed file with 9 additions and 9 deletions.
18 changes: 9 additions & 9 deletions modules/messages.nf
Original file line number Diff line number Diff line change
Expand Up @@ -20,31 +20,31 @@ def help_message() {
def version_message(String version) {
println(
"""
===========================================================================
Human DNA Removal and Mapping Statistics TAPIR Pipeline version ${version}
===========================================================================
============================================================================
HUMAN DNA REMOVAL AND MAPPING STATISTICS: TAPIR Pipeline version ${version}
============================================================================
""".stripIndent()
)

}


def pipeline_start_message(String version, Map params){
log.info "======================================================================"
log.info " KROCUS TAPIR MLST Pipeline version ${version}"
log.info "======================================================================"
log.info "==============================================================================="
log.info " HUMAN DNA REMOVAL AND MAPPING STATISTICS: TAPIR Pipeline version ${version}"
log.info "==============================================================================="
log.info "Running version : ${version}"
log.info "Fastq inputs : ${params.reads}"
log.info ""
log.info "-------------------------- Other parameters --------------------------"
log.info "-------------------------- Other parameters -----------------------------------"
params.sort{ it.key }.each{ k, v ->
if (v){
log.info "${k}: ${v}"
}
}
log.info "======================================================================"
log.info "==============================================================================="
log.info "Outputs written to path '${params.output_dir}'"
log.info "======================================================================"
log.info "==============================================================================="

log.info ""
}
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