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references.txt
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* surface reconstruction:
* "Cortical Surface-Based Analysis I: Segmentation and Surface
* Reconstruction", Dale, A.M., Fischl, B., Sereno, M.I.
* (1999) NeuroImage 9(2):179-194
* "Cortical Surface-Based Analysis II: Inflation, Flattening, and a
* Surface-Based Coordinate System", Fischl, B., Sereno, M.I., Dale, A.M.
* (1999) NeuroImage, 9(2):195-207.
* "Automated Manifold Surgery: Constructing Geometrically Accurate and
* Topologically Correct Models of the Human Cerebral Cortex",
* Fischl, B., Liu, A. and Dale, A.M.
* (2001) IEEE Transactions on Medical Imaging, 20(1):70-80.
* "Improved localization of cortical activity by combining EEG and MEG
* with MRI cortical surface reconstruction: A linear approach",
* Dale, A.M., and Sereno, M.I.
* (1993) Journal of Cognitive Neuroscience 5:162-176.
* "A Hybrid Approach to the Skull-Stripping Problem in MRI",
* Ségonne, F., Dale, A.M., Busa, E., Glessner, M., Salvolini, U.,
* Hahn, H.K., Fischl, B.
* (2004) NeuroImage, 22:1160-1075.
* "Genetic Algorithm for the Topology Correction of Cortical Surfaces",
* F. Segonne, E. Grimson, B. Fischl
* (2005) IPMI pp393--405.
* inter-subject spherical averaging:
* "High-resolution inter-subject averaging and a coordinate system
* for the cortical surface",
* Fischl, B., Sereno, M.I., Tootell, R.B.H., and Dale, A.M.
* (1999) Human Brain Mapping, 8:272-284(1999).
* thickness measurement:
* "Measuring the Thickness of the Human Cerebral Cortex from
* Magnetic Resonance Images", Fischl, B., and Dale, A.M.
* (2000) Proceedings of the National Academy of Sciences, 97:11044-11049.
* "Reliability of MRI-derived measurements of human cerebral cortical
* thickness: The effects of field strength, scanner upgrade and
* manufacturer", Han et al.
* (2006) NeuroImage, 32(1):180-194.
* cortical parcellation:
* "Automatically Parcellating the Human Cerebral Cortex", Fischl et al.
* (2004). Cerebral Cortex, 14:11-22.
* "An automated labeling system for subdividing the human cerebral cortex
* on MRI scans into gyral based regions of interest", Desikan et al.
* (2006) NeuroImage 31(3):968-80.
* "Atlas Renormalization for Improved Brain MR Image Segmentation Across
* Scanner Platforms", Han, X. and B. Fischl
* (2007) IEEE Transactions on Medical Imaging, 26(4):479-486.
* subcortical segmentation:
* "Whole Brain Segmentation: Automated Labeling of Neuroanatomical
* Structures in the Human Brain", Fischl et al.
* (2002) Neuron, 33:341-355.
* "Sequence-Independent Segmentation of Magnetic Resonance Images",
* Fischl, B., Salat. D.H., van der Kouwe, A.J.W., Makris, N.,
* Ségonne, F., and Dale, A.M.
* (2004) NeuroImage 23:S69-S84.
* related methodological papers
* "Discriminative Analysis for Image-Based Studies",
* P. Golland, B. Fischl, M. Spiridon, N. Kanwisher, R.L. Buckner,
* M.E. Shenton, R. Kikinis, A. Dale, W.E.L. Grimson
* (2002) In Proc. MICCAI'2002: Fifth International Conference on
* Medical Image Computing And Computer Assisted Intervention.
* LNCS 2488:508-515.
* "Permutation Tests for Classification: Towards Statistical
* Significance in Image-Based Studies", P. Golland and B. Fischl
* (2003) Proc. IPMI2003: 18th International Conference on
* Information Processing in Medical Imaging.
* "Topology Correction of Subcortical Segmentation",
* F. Segonne, E. Grimson and B. Fischl
* (2003) MICCAI 2003.