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Releases: astewartau/qsm-forward

v0.24

17 Oct 19:47
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  • Critical bugfix
  • Included label.json
  • Updated NIfTI file description header with some information such as TE, TR, B0

v0.23

11 Oct 15:14
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  • Add seed parameter with default value 42 for reproducibility
  • --version fixes
  • Voxel size of the reconstruction is correctly separated from the voxel size of the object data
  • Fixed bug with how --suffix is used
  • --save-field now also generates and saves the local field
  • Added necessary dataset_description.json, .bidsignore, and README files to BIDS output

v0.22

30 Apr 05:39
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  • Fix a bug where generated data did not always reflect the desired voxel size due to a bug in qsm_forward.resize

v0.21

22 Feb 05:38
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  • Set --save-phase to true by default

v0.20

07 Feb 05:21
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  • Added --save-phase and --suffix as parameters on qsm-forward command-line entrypoint

v0.19

02 Jan 04:44
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  • Use the original data folder from the QSM challenge 2.0 in-silico head phantom, rather than a modified version of it. This should make it easier for users with access to the data to use this package.

v0.18

13 Oct 00:47
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  • Added simple phantom generation options to main entrypoint

v0.17

11 Oct 03:38
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  • The B0 direction now correctly alters the affine to simulate an oblique acquisition

v0.16

04 Sep 00:57
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  • Improved BIDS compliance: made session and run entities optional; added acq entity, improved argument parsing in CLI, now using derivatives directory for 'derived' types such as masks, segmentations and fieldmaps; also used suffixes correctly including _Chimap, _fieldmap, _dseg and _mask, including the _desc- entities when multiple derivatives are generated that would otherwise clash.
  • Removed docs since they were difficult to maintain with minimal effort - the docstrings on the functions are good enough for now and the examples should make it clear how to use the software

v0.15

02 Aug 04:06
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  • The generate_susceptibility_phantom function is now imported correctly
  • The BIDS suffix can now be changed to support other weightings e.g. T1w, PD, etc.
  • Can now set whether to export phase images or not