Make dev dependencies optional

.github/workflows/benchmark.yml

@@ -38,7 +38,7 @@ jobs:
             - name: Install artistools
               run: |
                   python3 -m pip install uv
-                  python3 -m uv pip install --compile-bytecode --editable .
+                  python3 -m uv pip install --compile-bytecode --editable .[dev]
 
             - name: Cache test data
               uses: actions/cache@v4

.github/workflows/deploypypi.yml

@@ -142,4 +142,3 @@ jobs:
               with:
                   skip-existing: true
                   verbose: false
-                  #repository-url: https://test.pypi.org/legacy/

.github/workflows/pytest.yml

@@ -36,21 +36,18 @@ jobs:
             - name: Install artistools
               run: |
                   python3 -m pip install uv
-                  python3 -m uv pip install --system --upgrade pylint mypy
-                  python3 -m uv pip install --compile-bytecode --editable .
+                  python3 -m uv pip install --compile-bytecode --editable .[dev]
 
             - name: Run Ruff
               if: always()
               uses: astral-sh/ruff-action@v3
               with:
-                  version: 0.8.4
-                  args: "check --exit-non-zero-on-fix --no-fix"
+                args: "check --exit-non-zero-on-fix --no-fix"
 
             - name: Run Ruff Format
               if: always()
               uses: astral-sh/ruff-action@v3
               with:
-                version: 0.8.4
                 args: "format --check"
 
             - name: Run pyright
@@ -88,7 +85,7 @@ jobs:
             - name: Install artistools
               run: |
                   python3 -m pip install uv
-                  python3 -m uv pip install --compile-bytecode --editable .
+                  python3 -m uv pip install --compile-bytecode --editable .[dev]
 
             - uses: pre-commit/[email protected]
 
@@ -166,10 +163,22 @@ jobs:
                       pytest-rust-target-${{ runner.os }}-${{ hashFiles('**/Cargo.lock') }}-
                       pytest-rust-target-${{ runner.os }}-
 
-            - name: Install artistools
+            - name: Install artistools (no optional deps)
               run: |
                   python3 -m pip install uv
-                  python3 -m uv pip install --compile-bytecode --editable .
+                  python3 -m uv pip install .
+
+            - name: Check artistools command line tool
+              run: |
+                  artistools --help
+                  artistools completions
+
+            - name: Download/extract test data
+              working-directory: tests/data/
+              run: source ./setuptestdata.sh
+
+            - name: Install artistools[dev]
+              run: python3 -m uv pip install --compile-bytecode --editable .[dev]
 
             - name: Cache test data
               uses: actions/cache@v4
@@ -178,22 +187,11 @@ jobs:
                   path: tests/data/*.tar.xz
                   key: testdata20231114
 
-            - name: Download/extract test data
-              working-directory: tests/data/
-              run: source ./setuptestdata.sh
-
-            - name: Check artistools command line tool
-              run: |
-                  artistools --help
-                  artistools completions
-
             - name: Test with pytest
-              run: |
-                  pytest --cov=./ --cov-report=xml
+              run: python3 -m pytest --cov=./ --cov-report=xml
 
             - name: Report coverage
-              run: |
-                  coverage report
+              run: python3 -m coverage report
 
             - name: Upload coverage to Codecov
               uses: codecov/codecov-action@v5

README.md

@@ -14,7 +14,7 @@ artistools can be installed from PyPI using `pip install artistools'. For develo
 ```sh
 git clone https://github.com/artis-mcrt/artistools.git
 cd artistools
-python3 -m pip install -e .
+python3 -m pip install --editable .[dev]
 pre-commit install
 ```
 

pyproject.toml

@@ -28,10 +28,51 @@ classifiers = [
     "Framework :: Matplotlib",
     "Intended Audience :: Science/Research",
 ]
-dynamic = ["version", "dependencies"]
+dynamic = ["version"]
 requires-python = ">=3.10"
 license = { text = "MIT" }
 readme = { file = "README.md", content-type = 'text/markdown' }
+dependencies = [
+    "argcomplete>=3.5.1",
+    "astropy>=6.1.4",
+    "extinction>=0.4.7",
+    "george>=0.4.3",
+    "imageio>=2.36.0",
+    "matplotlib>=3.9.2",
+    "numexpr>=2.10.1",
+    "numpy>=2.2.0",
+    "pandas>=2.2.3",
+    "plotly>=5.24.1",
+    "polars>=1.18.0",
+    "pyarrow>=18.1.0",
+    "pynonthermal>=2024.7.4",
+    "pypdf>=5.1.0",
+    "PyYAML>=6.0.2",
+    "rich>=13.9.4",
+    "scipy>=1.14.1",
+    "tabulate>=0.9",
+    "tqdm>=4.67.1",
+    "wheel>=0.44.0",
+    "zstandard>=0.23.0",
+]
+
+[project.optional-dependencies]
+dev = [
+    "mypy[faster-cache]>=1.14.1",
+    "pandas-stubs>=2.2.3.241126",
+    "pre-commit>=4.0.1",
+    "pylint>=3.3.3",
+    "pyright>=1.1.387",
+    "pytest>=8.3.3",
+    "pytest-codspeed>=3.0.0",
+    "pytest-cov>=6.0.0",
+    "pytest-xdist[psutil]>=3.6.1",
+    "types-PyYAML>=6.0.12.20240917",
+    "types-tabulate>=0.9.0.20240106",
+    "typeguard>=4.4.1",
+    "ruff>=0.8.6",
+]
+pyvista = ["pyvista>=0.44.1"]
 
 [project.urls]
 Repository = "https://www.github.com/artis-mcrt/artistools"
@@ -346,9 +387,6 @@ exclude = [
     "**/target",
 ]
 
-[tool.setuptools.dynamic]
-dependencies = { file = ["requirements.txt"] }
-
 [tool.setuptools_scm]
 version_file = "_version.py"
 local_scheme = "no-local-version"