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A Python extension of the fasta validator

Python 7 1 Updated Feb 5, 2023
Rust 51 13 Updated Sep 20, 2022

Aggregate results from bioinformatics analyses across many samples into a single report.

JavaScript 1,253 608 Updated Jan 23, 2025

A collection of sequencing protocols and bioinformatic resources for SARS-CoV-2 sequencing.

Perl 348 84 Updated Apr 12, 2023

Run your GitHub Actions locally 🚀

Go 57,149 1,439 Updated Jan 22, 2025

Interactive roadmaps, guides and other educational content to help developers grow in their careers.

TypeScript 306,665 40,147 Updated Jan 23, 2025

Beginner's Series: Introduction to JavaScript (Node.js)

JavaScript 1,795 214 Updated Mar 26, 2024

📝 Algorithms and data structures implemented in JavaScript with explanations and links to further readings

JavaScript 189,650 30,423 Updated Aug 19, 2024

Parse multiple Antimicrobial Resistance Analysis Reports into a common data structure

Python 145 30 Updated Jan 17, 2025

🔗Genome assembly scaffolder using minimizer graphs

Python 83 15 Updated Oct 2, 2024

A fast whole-genome aligner based on de Bruijn graphs

C++ 142 19 Updated Sep 29, 2022

screen sharing for developers https://screego.net/

Go 8,220 579 Updated Dec 7, 2024

Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis

Python 302 86 Updated Jul 7, 2023

A flexible pipeline for complete analysis of bacterial genomes

Nextflow 428 74 Updated Nov 27, 2024

Nanopore sequence read simulator

Python 254 59 Updated Nov 5, 2024

WtP: Phage identification via nextflow and docker or singularity

Nextflow 103 15 Updated Aug 2, 2024

30 days of Python programming challenge is a step-by-step guide to learn the Python programming language in 30 days. This challenge may take more than100 days, follow your own pace. These videos ma…

Python 44,088 8,419 Updated Oct 9, 2024

A book series on JavaScript. @YDKJS on twitter.

180,752 33,578 Updated Sep 5, 2024

30 days of JavaScript programming challenge is a step-by-step guide to learn JavaScript programming language in 30 days. This challenge may take more than 100 days, please just follow your own pace…

JavaScript 43,797 10,148 Updated Aug 19, 2024

30 Days of React challenge is a step by step guide to learn React in 30 days. These videos may help too: https://www.youtube.com/channel/UC7PNRuno1rzYPb1xLa4yktw

JavaScript 26,358 7,511 Updated Oct 9, 2024

All Algorithms implemented in Python

Python 196,661 46,162 Updated Jan 23, 2025

😎 Awesome lists about all kinds of interesting topics

343,176 28,339 Updated Dec 12, 2024

Learn React Hooks! 🎣 ⚛

TypeScript 2,799 1,915 Updated Jan 17, 2025

Cluster Investigation & Virus Epidemiology Tool

Python 50 14 Updated Dec 3, 2022

An opinionated Dockerfile linter.

JavaScript 995 83 Updated Sep 27, 2023

A Nextflow pipeline for running the ARTIC network's fieldbioinformatics tools (https://github.com/artic-network/fieldbioinformatics), with a focus on ncov2019

Nextflow 91 88 Updated Nov 8, 2023

Conda recipes for the bioconda channel.

Shell 1,664 3,333 Updated Jan 24, 2025

Identification & characterization of bacterial plasmid-borne contigs from short-read draft assemblies.

Python 112 15 Updated Jan 22, 2025

Test data to be used for automated testing with the nf-core pipelines

111 363 Updated Jan 21, 2025

MMseqs2: ultra fast and sensitive search and clustering suite

C 1,517 206 Updated Jan 18, 2025
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