Migrate to Jupyter Book

Add deployment configuration

.gitignore

@@ -1,10 +1,155 @@
+# Created by https://www.gitignore.io/api/python
+# Edit at https://www.gitignore.io/?templates=python
+
+### Python ###
+# Byte-compiled / optimized / DLL files
+__pycache__/
+*.py[cod]
+*$py.class
+
+# C extensions
+*.so
+
+# Distribution / packaging
+.Python
+build/
+develop-eggs/
+dist/
+downloads/
+eggs/
+.eggs/
+lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+pip-wheel-metadata/
+share/python-wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+MANIFEST
+
+# PyInstaller
+#  Usually these files are written by a python script from a template
+#  before PyInstaller builds the exe, so as to inject date/other infos into it.
+*.manifest
+*.spec
+
+# Installer logs
+pip-log.txt
+pip-delete-this-directory.txt
+
+# Unit test / coverage reports
+htmlcov/
+.tox/
+.nox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+.hypothesis/
+.pytest_cache/
+
+# Translations
+*.mo
+*.pot
+
+# Scrapy stuff:
+.scrapy
+
+# Sphinx documentation
+docs/_build/
+
+# PyBuilder
+target/
+
+# pyenv
+.python-version
+
+# pipenv
+#   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
+#   However, in case of collaboration, if having platform-specific dependencies or dependencies
+#   having no cross-platform support, pipenv may install dependencies that don't work, or not
+#   install all needed dependencies.
+#Pipfile.lock
+
+# celery beat schedule file
+celerybeat-schedule
+
+# SageMath parsed files
+*.sage.py
+
+# Spyder project settings
+.spyderproject
+.spyproject
+
+# Rope project settings
+.ropeproject
+
+# Mr Developer
+.mr.developer.cfg
+.project
+.pydevproject
+
+# mkdocs documentation
+/site
+
+# mypy
+.mypy_cache/
+.dmypy.json
+dmypy.json
+
+# Pyre type checker
+.pyre/
+
+
+### VirtualEnv ###
+# Virtualenv
+# http://iamzed.com/2009/05/07/a-primer-on-virtualenv/
+[Bb]in
+[Ii]nclude
+[Ll]ib
+[Ll]ib64
+[Ll]ocal
+pyvenv.cfg
+.env
 .venv
-*.html
-.DS_Store
-build
-_repo
-_build
-__pycache__
-.idea/
-*/.ipynb_checkpoints
-cliffords2.pickle
+env/
+venv/
+ENV/
+env.bak/
+venv.bak/
+pip-selfcheck.json
+
+### Jekyll ###
+_site/
+.sass-cache/
+.jekyll-cache/
+.jekyll-metadata
+
+### Sass ###
+.sass-cache/
+*.css.map
+*.sass.map
+*.scss.map
+
+### JupyterNotebooks ###
+.ipynb_checkpoints
+*/.ipynb_checkpoints/*
+
+# IPython
+profile_default/
+ipython_config.py
+
+# End of https://www.gitignore.io/api/python
+
+## Jupyter Book
+_build/
+
+## IDEs
+.vscode
+.idea

.travis.yml

@@ -2,11 +2,16 @@ language: python
 python: "3.7"
 install:
   - pip install -r requirements.txt
+  - pip install -r requirements-dev.txt
+  - gem install bundler
+  - make install
 script:
-  - bash gen-html.sh
+  - make runall
+before_deploy:
+  - make book
+  - make build
 deploy:
   provider: script
-  skip_cleanup: true
   script: bash deploy.sh
   on:
-    branch: master
+    branch: master

Gemfile

@@ -0,0 +1,21 @@
+source 'https://rubygems.org'
+
+group :jekyll_plugins do
+  gem 'github-pages'
+  gem 'jekyll-feed', '~> 0.6'
+
+  # Textbook plugins
+  gem 'jekyll-redirect-from'
+  gem 'jekyll-scholar'
+end
+
+# Windows does not include zoneinfo files, so bundle the tzinfo-data gem
+gem 'tzinfo-data', platforms: [:mingw, :mswin, :x64_mingw, :jruby]
+
+# Performance-booster for watching directories on Windows
+gem 'wdm', '~> 0.1.0' if Gem.win_platform?
+
+# Development tools
+gem 'guard', '~> 2.14.2'
+gem 'guard-jekyll-plus', '~> 2.0.2'
+gem 'guard-livereload', '~> 2.5.2'