Release v0.1.1

.github/workflows/publish.yml

@@ -59,7 +59,7 @@ jobs:
         CIBW_ARCHS: x86_64
         CIBW_BUILD: 'cp*-macosx_x86_64'
         CIBW_ENVIRONMENT: CARGO_NET_GIT_FETCH_WITH_CLI=true MACOSX_DEPLOYMENT_TARGET=12.0
-        CIBW_TEST_SKIP: "*-macosx_arm64 *-macosx_universal2:arm64"
+        CIBW_TEST_SKIP: "*"
       with:
         output-dir: dist
     - uses: actions/upload-artifact@v4

CHANGELOG.md

@@ -6,7 +6,21 @@ and this project adheres to [Semantic Versioning](http://semver.org/spec/v2.0.0.
 
 
 ## [Unreleased]
-[Unreleased]: https://github.com/althonos/pysylph/compare/v0.1.0...HEAD
+[Unreleased]: https://github.com/althonos/pysylph/compare/v0.1.1...HEAD
+
+
+## [v0.1.1] - 2024-10-25
+[v0.1.1]: https://github.com/althonos/pysylph/compare/v0.1.0...v0.1.1
+
+### Added
+- Type annotations to `pysylph` module.
+- Sphinx documentation with API reference hosted on ReadTheDocs.
+
+### Fixed
+- Add missing `ProfileResult` class to the `pysylph.lib` module.
+
+### Changed
+- Implement reading sequence data using the buffer-protocol in `Sketcher` methods.
 
 
 ## [v0.1.0] - 2024-10-25

Cargo.toml

@@ -1,6 +1,6 @@
 [package]
 name = "pysylph"
-version = "0.1.0"
+version = "0.1.1"
 edition = "2021"
 authors = ["Martin Larralde <[email protected]>"]
 license = "MIT"
@@ -35,4 +35,4 @@ extension-module = ["pyo3/extension-module"]
 [[test]]
 name = "unittest"
 path = "src/pysylph/tests/unittest.rs"
-harness = false
+harness = false

README.md

@@ -31,7 +31,7 @@ framework, that provides bindings to `sylph`. It directly links to the
 `sylph` code, which has the following advantages over CLI wrappers:
 
 - **pre-built wheels**: `pysylph` is distributed on PyPI and features
-  pre-built wheels for common platforms, including x86-64 and Arm64 UNIX.
+  pre-built wheels for common platforms, including x86-64 and Arm64.
 - **single dependency**: If your software or your analysis pipeline is
   distributed as a Python package, you can add `pysylph` as a dependency to
   your project, and stop worrying about the `sylph` binary being present on

docs/_static/json/switcher.json

@@ -1,7 +1,7 @@
 [
     {
         "name": "v0.1 (latest)",
-        "version": "0.1.0",
-        "url": "https://pysylph.readthedocs.io/en/v0.1.0/"
+        "version": "0.1.1",
+        "url": "https://pysylph.readthedocs.io/en/v0.1.1/"
     }
 ]

pyproject.toml

@@ -5,7 +5,7 @@ build-backend = "maturin"
 [project]
 name = "pysylph"
 dynamic = ["version"]
-version = "0.1.0"
+version = "0.1.1"
 description = "PyO3 bindings and Python interface to sylph, an ultrafast method for containment ANI querying and taxonomic profiling."
 readme = 'README.md'
 requires-python = ">=3.7"