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0.2.0

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@althonos althonos released this 19 Jun 23:36
· 141 commits to main since this release

Added

  • Sketch.clear method to remove all sequences currently in a Sketch and reset the list of minimizers.
  • SIMD code to read and reverse-complement the input sequences efficiently on supported platforms (x86-64 with SSE2 or SSSE3, and ARM with NEON).

Changed

  • Split the Sketch type in two depending on whether the object is at the sketching stage (Sketch) or at the querying stage (Mapper).
  • Sketch.add_genome, Sketch.add_draft, Mapper.query_genome and Mapper.query_draft can now be passed a Unicode string for the sequence.

Fixed

  • Integer underflow causing minimizers out of the block window to be added to the final minimizers list.