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Release version 1.5.0 #86

Merged
merged 445 commits into from
Sep 23, 2024
Merged

Release version 1.5.0 #86

merged 445 commits into from
Sep 23, 2024

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alexzwanenburg
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@alexzwanenburg
Update DESCRIPTION
c715c4e
@alexzwanenburg
Fixed code style issues.
6c3150b
@alexzwanenburg
Fixed code style issues.
7adc683
@alexzwanenburg
Fixed code style issues.
04c79ea
@alexzwanenburg
Fixed code style issues.
d45f0aa
@alexzwanenburg
Fixed code style issues.
cce9a6c
@alexzwanenburg
Fixed code style issues.
33efda0
@alexzwanenburg
Renamed check_column_name to .replace_illegal_column_name
466b036 
This better reflects what the function does.
@alexzwanenburg
Fixed code style issues, aside from function names.
d44e966
@alexzwanenburg
Renamed test.create_good_data_set to test_create_good_data
94c515d
@alexzwanenburg
Renamed test.create_small_good_data_set to test_create_small_good_data
50700ed
@alexzwanenburg
Renamed test.create_good_data_no_censoring_set to test_create_good_da…
cb781aa 
…ta_without_censoring
@alexzwanenburg
Renamed test.create_good_data_invariant_set to test_create_invariant_…
a3647cc 
…good_data
@alexzwanenburg
Renamed test.create_good_data_one_censored_set to test_create_good_da…
f7b16b0 
…ta_one_censored
@alexzwanenburg
Renamed test.create_good_data_few_censored_set to test_create_good_da…
33d0deb 
…ta_few_censored
@alexzwanenburg
Rename test_create_good_data_set_random_na_data to test_create_good_d…
53ff254 
…ata_random_missing
@alexzwanenburg
Renamed test.create_empty_data_set to test_create_empty_data
7ddff1f
@alexzwanenburg
Renamed test.create_no_feature_data_set to test_create_data_without_f…
210aee5 
…eature
@alexzwanenburg
Update TestFunctions.R
6b7408e
@alexzwanenburg
Rename test.create_bootstrapped_data_set to test_create_bootstrapped_…
625780d 
…data
@alexzwanenburg
Renamed test.create_one_sample_data_set to test_create_one_sample_data
ee36ba0
@alexzwanenburg
Renamed test.create_all_identical_data_set to test_create_all_identic…
1e401b3 
…al_data
@alexzwanenburg
Renamed test.create_one_feature_data_set to test_create_single_featur…
cb6317e 
…e_data
@alexzwanenburg
Rename test.create_one_feature_one_sample_data_set to test_create_sin…
cec93a2 
…gle_feature_one_sample_data
@alexzwanenburg
Renamed test.create_one_feature_invariant_data_set to test_create_sin…
271932f 
…gle_feature_invariant_data
@alexzwanenburg
Renamed test.create_one_feature_two_values_data_set to test_create_si…
87b410d 
…ngle_feature_two_values_data
@alexzwanenburg
Rename test.create_wide_data_set to test_create_wide_data
ca518eb
@alexzwanenburg
Renamed test.create_bad_data_set to test_create_bad_data
ed51a0c
@alexzwanenburg
Rename test.create_small_bad_data_set to test_create_small_bad_data
e04e4e4
@alexzwanenburg
Renamed test.create_prospective_data_set to test_create_prospective_data
112d0f0
@alexzwanenburg alexzwanenburg self-assigned this Sep 20, 2024
@alexzwanenburg
Merge branch 'master' into dev1.5.0
135771d
@alexzwanenburg
Undo some of the changes introduced by merging with master.
d038048
@alexzwanenburg
Ensure that documentation is present.
720e8e4
@alexzwanenburg
Add documentation.
7a6c41d
@alexzwanenburg
Added two checks for noSuggests test.
5d7218c
@alexzwanenburg
Set correct winsorising fraction.
1dd5287
@alexzwanenburg
Fixed incorrect function reference.
9bce5a2
@alexzwanenburg
Fix incorrect method use.
cc63d70
@alexzwanenburg
Thresholds for clustering with correlation-based metrics are now comp…
cca5399 
…uted correctly
@alexzwanenburg
Added check on suggested packages.
5cd1221
@alexzwanenburg
Select for correct package.
79fa041
@alexzwanenburg
power.transform is also required for transformation_method = "none"
762c213
@alexzwanenburg
Fixed text.
87c7993
@alexzwanenburg
Add is_installed check to test_data_package_installed to work better …
8e53d98 
…where packages are not actually missing, but rather pretending to be.
@alexzwanenburg
Update cran-comments.md
7b35b48
@alexzwanenburg alexzwanenburg merged commit 7fe6fb0 into master Sep 23, 2024
4 checks passed
@alexzwanenburg alexzwanenburg deleted the dev1.5.0 branch September 23, 2024 15:16
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