Create species-specific files with only headers if no data for specie…

…s, instead of not creating files
WormBase · Feb 12, 2021 · de7f0ca · de7f0ca
1 parent 0ab700c
commit de7f0ca
Showing 1 changed file with 1 addition and 2 deletions.
diff --git a/scripts/ONTOLOGY/GAF.pm b/scripts/ONTOLOGY/GAF.pm
@@ -136,11 +136,10 @@ sub make_species_files {
 
 
     for my $wb(values %accessors) {
-	next unless exists $species_lines{$wb->ncbi_tax_id};
 	my $species_file = $file . '.' . $wb->full_name('-g_species' => 1);
 	open (SPECIES, '>', $species_file) or die "Could not open $species_file for writing\n";
 	print SPECIES join("\n", @headers) . "\n";
-	print SPECIES join("\n", @{$species_lines{$wb->ncbi_tax_id}}) . "\n";
+	print SPECIES join("\n", @{$species_lines{$wb->ncbi_tax_id}}) . "\n" if exists $species_lines{$wb->ncbi_tax_id};;
 	close (SPECIES);
     }