Needed to dereference the Sequence_collection object to get the name

WormBase · Jun 14, 2019 · 25354ab · 25354ab
1 parent 79ae0c8
commit 25354ab
Showing 1 changed file with 4 additions and 4 deletions.
diff --git a/scripts/make_assembly_manifest.pl b/scripts/make_assembly_manifest.pl
@@ -114,15 +114,15 @@
     if ($obj->{full_name} =~ /Caenorhabditis/) {
       # for Caen, default to the strain name; only use assembly name if strain not defined
       if (defined $strain) {
-        $short_label = $strain;
+        $short_label = $strain->name;
       } elsif (defined $assembly_name) {
-        $short_label = $assembly_name;
+        $short_label = $assembly_name->name;
       }
     } else {
       if (defined $assembly_name) {
-        $short_label = $assembly_name;
+        $short_label = $assembly_name->name;
       } elsif (defined $strain) {
-        $short_label = $strain;
+        $short_label = $strain->name;
       }
     }
     $short_label = $bioproj if not defined $short_label;