add a way to show error or warning during dcm2niix execution

UNFmontreal · Jun 18, 2024 · 9ae71ff · 9ae71ff
1 parent 4532d44
commit 9ae71ff
Showing 1 changed file with 5 additions and 1 deletion.
diff --git a/dcm2bids/dcm2niix_gen.py b/dcm2bids/dcm2niix_gen.py
@@ -142,7 +142,11 @@ def execute(self):
                     shutil.rmtree(self.rm_tmp_dir)
                     self.logger.info("Temporary dicom directory removed.")
 
-                self.logger.debug(f"\n{output}")
+                if "Warning" in output or "Error" in output:
+                    self.logger.info(f"\n{output}")
+                else:
+                    self.logger.debug(f"\n{output}")
+
                 self.logger.info("Check log file for dcm2niix output\n")
 
         else: