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Convert tests and doctests from Cirrus to GHA (#415)
* created ci-tests * added caches
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# reference: | ||
# - https://github.com/actions/cache | ||
# - https://github.com/actions/checkout | ||
# - https://github.com/marketplace/actions/setup-miniconda | ||
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name: ci-tests | ||
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on: | ||
push: | ||
branches: | ||
- "main" | ||
- "v*x" | ||
tags: | ||
- "v*" | ||
pull_request: | ||
branches: | ||
- "*" | ||
workflow_dispatch: | ||
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concurrency: | ||
group: ${{ github.workflow }}-${{ github.ref }} | ||
cancel-in-progress: true | ||
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jobs: | ||
tests: | ||
name: "${{ matrix.session }} (py${{ matrix.python-version }} ${{ matrix.os }}) [${{ matrix.iris-source }}]" | ||
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runs-on: ${{ matrix.os }} | ||
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defaults: | ||
run: | ||
shell: bash -l {0} | ||
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strategy: | ||
fail-fast: false | ||
matrix: | ||
os: ["ubuntu-latest"] | ||
python-version: ["3.11"] | ||
session: ["doctest"] | ||
# conda-forge doesn't fit within nose char limits, change with pytest | ||
iris-source : ["condaforge"] | ||
include: | ||
- os: "ubuntu-latest" | ||
python-version: "3.11" | ||
session: "tests" | ||
iris-source: "condaforge" | ||
- os: "ubuntu-latest" | ||
python-version: "3.11" | ||
session: "tests" | ||
iris-source: "source" | ||
- os: "ubuntu-latest" | ||
python-version: "3.10" | ||
session: "tests" | ||
iris-source: "condaforge" | ||
- os: "ubuntu-latest" | ||
python-version: "3.9" | ||
session: "tests" | ||
iris-source: "condaforge" | ||
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env: | ||
IRIS_TEST_DATA_VERSION: "2.24" | ||
ENV_NAME: "ci-tests" | ||
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steps: | ||
- name: "checkout" | ||
uses: actions/checkout@v4 | ||
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- name: "environment configure" | ||
env: | ||
# Maximum cache period (in weeks) before forcing a cache refresh. | ||
CACHE_WEEKS: 2 | ||
run: | | ||
echo "CACHE_PERIOD=$(date +%Y).$(expr $(date +%U) / ${CACHE_WEEKS})" >> ${GITHUB_ENV} | ||
echo "LOCK_FILE=requirements/locks/py$(echo ${{ matrix.python-version }} | tr -d '.')-linux-64.lock" >> ${GITHUB_ENV} | ||
- name: "data cache" | ||
uses: ./.github/workflows/composite/iris-data-cache | ||
with: | ||
cache_build: 0 | ||
env_name: ${{ env.ENV_NAME }} | ||
version: ${{ env.IRIS_TEST_DATA_VERSION }} | ||
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- name: "conda package cache" | ||
uses: ./.github/workflows/composite/conda-pkg-cache | ||
with: | ||
cache_build: 0 | ||
cache_period: ${{ env.CACHE_PERIOD }} | ||
env_name: ${{ env.ENV_NAME }} | ||
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- name: "conda install" | ||
uses: conda-incubator/setup-miniconda@v3 | ||
with: | ||
miniforge-version: latest | ||
channels: conda-forge,defaults | ||
activate-environment: ${{ env.ENV_NAME }} | ||
auto-update-conda: false | ||
use-only-tar-bz2: true | ||
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- name: "conda environment cache" | ||
uses: ./.github/workflows/composite/conda-env-cache | ||
with: | ||
cache_build: 0 | ||
cache_period: ${{ env.CACHE_PERIOD }} | ||
env_name: ${{ env.ENV_NAME }} | ||
install_packages: "cartopy nox pip" | ||
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- name: "conda info" | ||
run: | | ||
conda info | ||
conda list | ||
- name: "cartopy cache" | ||
uses: ./.github/workflows/composite/cartopy-cache | ||
with: | ||
cache_build: 0 | ||
cache_period: ${{ env.CACHE_PERIOD }} | ||
env_name: ${{ env.ENV_NAME }} | ||
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- name: "nox cache" | ||
uses: ./.github/workflows/composite/nox-cache | ||
with: | ||
cache_build: 0 | ||
env_name: ${{ env.ENV_NAME }} | ||
lock_file: ${{ env.LOCK_FILE }} | ||
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- name: "iris ${{ matrix.session }}" | ||
env: | ||
PY_VER: ${{ matrix.python-version }} | ||
IRIS_SOURCE: ${{ matrix.iris-source }} | ||
run: | | ||
nox --session ${{ matrix.session }} -- --test-data-dir ${HOME}/iris-test-data/test_data |
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name: "cartopy-cache" | ||
description: "create and cache cartopy assets" | ||
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# | ||
# Assumes the environment contains the following variables: | ||
# - CONDA | ||
# | ||
inputs: | ||
cache_build: | ||
description: "conda environment cache build number" | ||
required: false | ||
default: "0" | ||
cache_period: | ||
description: "conda environment cache timestamp" | ||
required: true | ||
env_name: | ||
description: "environment name" | ||
required: true | ||
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runs: | ||
using: "composite" | ||
steps: | ||
- uses: actions/cache@v3 | ||
id: cartopy-cache | ||
with: | ||
path: ~/.local/share/cartopy | ||
key: ${{ runner.os }}-cartopy-${{ inputs.env_name }}-p${{ inputs.cache_period }}-b${{ inputs.cache_build }} | ||
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- if: steps.cartopy-cache.outputs.cache-hit != 'true' | ||
env: | ||
CARTOPY_SHARE_DIR: ~/.local/share/cartopy | ||
CARTOPY_FEATURE: https://raw.githubusercontent.com/SciTools/cartopy/v0.20.0/tools/cartopy_feature_download.py | ||
shell: bash | ||
run: | | ||
# Require to explicitly activate the environment within the composite action. | ||
source ${{ env.CONDA }}/etc/profile.d/conda.sh >/dev/null 2>&1 | ||
conda activate ${{ inputs.env_name }} | ||
wget --quiet ${CARTOPY_FEATURE} | ||
mkdir -p ${CARTOPY_SHARE_DIR} | ||
# Requires a pre-installed version of cartopy within the environment. | ||
python cartopy_feature_download.py physical --output ${CARTOPY_SHARE_DIR} --no-warn |
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name: "conda-env-cache" | ||
description: "create and cache the conda environment" | ||
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# | ||
# Assumes the environment contains the following variables: | ||
# - CONDA | ||
# | ||
inputs: | ||
cache_build: | ||
description: "conda environment cache build number" | ||
required: false | ||
default: "0" | ||
cache_period: | ||
description: "conda environment cache timestamp" | ||
required: true | ||
env_name: | ||
description: "environment name" | ||
required: true | ||
install_packages: | ||
description: "conda packages to install into environment" | ||
required: true | ||
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runs: | ||
using: "composite" | ||
steps: | ||
- uses: actions/cache@v3 | ||
id: conda-env-cache | ||
with: | ||
path: ${{ env.CONDA }}/envs/${{ inputs.env_name }} | ||
key: ${{ runner.os }}-conda-env-${{ inputs.env_name }}-p${{ inputs.cache_period }}-b${{ inputs.cache_build }} | ||
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- if: steps.conda-env-cache.outputs.cache-hit != 'true' | ||
shell: bash | ||
run: | | ||
conda install --quiet --name ${{ inputs.env_name }} ${{ inputs.install_packages }} |
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name: "conda-pkg-cache" | ||
description: "cache the conda environment packages" | ||
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inputs: | ||
cache_build: | ||
description: "conda environment cache build number" | ||
required: false | ||
default: "0" | ||
cache_period: | ||
description: "conda environment cache timestamp" | ||
required: true | ||
env_name: | ||
description: "environment name" | ||
required: true | ||
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runs: | ||
using: "composite" | ||
steps: | ||
- uses: actions/cache@v3 | ||
with: | ||
path: ~/conda_pkgs_dir | ||
key: ${{ runner.os }}-conda-pkgs-${{ inputs.env_name }}-p${{ inputs.cache_period }}-b${{ inputs.cache_build }} |
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name: "iris-data-cache" | ||
description: "create and cache the iris test data" | ||
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inputs: | ||
cache_build: | ||
description: "data cache build number" | ||
required: false | ||
default: "0" | ||
env_name: | ||
description: "environment name" | ||
required: true | ||
version: | ||
description: "iris test data version" | ||
required: true | ||
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runs: | ||
using: "composite" | ||
steps: | ||
- uses: actions/cache@v3 | ||
id: data-cache | ||
with: | ||
path: ~/iris-test-data | ||
key: ${{ runner.os }}-iris-test-data-${{ inputs.env_name }}-v${{ inputs.version }}-b${{ inputs.cache_build }} | ||
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- if: steps.data-cache.outputs.cache-hit != 'true' | ||
shell: bash | ||
run: | | ||
wget --quiet https://github.com/SciTools/iris-test-data/archive/v${{ inputs.version }}.zip -O iris-test-data.zip | ||
unzip -q iris-test-data.zip | ||
mv iris-test-data-${{ inputs.version }} ~/iris-test-data |
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name: "nox cache" | ||
description: "cache the nox test environments" | ||
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inputs: | ||
cache_build: | ||
description: "nox cache build number" | ||
required: false | ||
default: "0" | ||
env_name: | ||
description: "environment name" | ||
required: true | ||
lock_file: | ||
description: "conda-lock environment requirements filename" | ||
required: true | ||
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runs: | ||
using: "composite" | ||
steps: | ||
- uses: actions/cache@v3 | ||
with: | ||
path: ${{ github.workspace }}/.nox | ||
key: ${{ runner.os }}-nox-${{ inputs.env_name }}-py${{ matrix.python-version }}-b${{ inputs.cache_build }}-${{ hashFiles(inputs.lock_file) }} |