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update the dataframe creation
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mdsage1 committed Mar 20, 2024
1 parent 21a2906 commit eaee652
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions apps/openchallenges/edam-etl/src/main.py
Original file line number Diff line number Diff line change
Expand Up @@ -5,7 +5,7 @@
from os import getenv
from typing import Optional

"""Get config from the environment variables"""
# Get config from the environment variables

OC_DB_URL = getenv("OC_DB_URL")
VERSION = getenv("OC_DB_VERSION")
Expand Down Expand Up @@ -94,7 +94,7 @@ def main() -> None:
f"https://github.com/edamontology/edamontology/raw/main/releases/EDAM_{VERSION}.csv"
)
download_edam_csv(url, VERSION)
df: pd.DataFrame = transform_to_dataframe(VERSION)
df = transform_to_dataframe(VERSION)
print_info_statistics(df)

if __name__ == "__main__":
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