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feat(openchallenges): create endpoint to search EDAM concepts (#2622)
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90 changes: 90 additions & 0 deletions
90
...rc/main/java/org/sagebionetworks/openchallenges/challenge/service/api/EdamConceptApi.java
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,90 @@ | ||
| /** | ||
| * NOTE: This class is auto generated by OpenAPI Generator (https://openapi-generator.tech) (6.2.1). | ||
| * https://openapi-generator.tech Do not edit the class manually. | ||
| */ | ||
| package org.sagebionetworks.openchallenges.challenge.service.api; | ||
|
|
||
| import io.swagger.v3.oas.annotations.Operation; | ||
| import io.swagger.v3.oas.annotations.Parameter; | ||
| import io.swagger.v3.oas.annotations.media.Content; | ||
| import io.swagger.v3.oas.annotations.media.Schema; | ||
| import io.swagger.v3.oas.annotations.responses.ApiResponse; | ||
| import io.swagger.v3.oas.annotations.tags.Tag; | ||
| import javax.annotation.Generated; | ||
| import javax.validation.Valid; | ||
| import javax.validation.constraints.*; | ||
| import org.sagebionetworks.openchallenges.challenge.service.model.dto.BasicErrorDto; | ||
| import org.sagebionetworks.openchallenges.challenge.service.model.dto.EdamConceptSearchQueryDto; | ||
| import org.sagebionetworks.openchallenges.challenge.service.model.dto.EdamConceptsPageDto; | ||
| import org.springframework.http.ResponseEntity; | ||
| import org.springframework.validation.annotation.Validated; | ||
| import org.springframework.web.bind.annotation.*; | ||
|
|
||
| @Generated(value = "org.openapitools.codegen.languages.SpringCodegen") | ||
| @Validated | ||
| @Tag(name = "EdamConcept", description = "Operations about EDAM concepts.") | ||
| public interface EdamConceptApi { | ||
|
|
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| default EdamConceptApiDelegate getDelegate() { | ||
| return new EdamConceptApiDelegate() {}; | ||
| } | ||
|
|
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| /** | ||
| * GET /edamConcepts : List EDAM concepts List EDAM concepts | ||
| * | ||
| * @param edamConceptSearchQuery The search query used to find EDAM concepts. (optional) | ||
| * @return Success (status code 200) or Invalid request (status code 400) or The request cannot be | ||
| * fulfilled due to an unexpected server error (status code 500) | ||
| */ | ||
| @Operation( | ||
| operationId = "listEdamConcepts", | ||
| summary = "List EDAM concepts", | ||
| tags = {"EdamConcept"}, | ||
| responses = { | ||
| @ApiResponse( | ||
| responseCode = "200", | ||
| description = "Success", | ||
| content = { | ||
| @Content( | ||
| mediaType = "application/json", | ||
| schema = @Schema(implementation = EdamConceptsPageDto.class)), | ||
| @Content( | ||
| mediaType = "application/problem+json", | ||
| schema = @Schema(implementation = EdamConceptsPageDto.class)) | ||
| }), | ||
| @ApiResponse( | ||
| responseCode = "400", | ||
| description = "Invalid request", | ||
| content = { | ||
| @Content( | ||
| mediaType = "application/json", | ||
| schema = @Schema(implementation = BasicErrorDto.class)), | ||
| @Content( | ||
| mediaType = "application/problem+json", | ||
| schema = @Schema(implementation = BasicErrorDto.class)) | ||
| }), | ||
| @ApiResponse( | ||
| responseCode = "500", | ||
| description = "The request cannot be fulfilled due to an unexpected server error", | ||
| content = { | ||
| @Content( | ||
| mediaType = "application/json", | ||
| schema = @Schema(implementation = BasicErrorDto.class)), | ||
| @Content( | ||
| mediaType = "application/problem+json", | ||
| schema = @Schema(implementation = BasicErrorDto.class)) | ||
| }) | ||
| }) | ||
| @RequestMapping( | ||
| method = RequestMethod.GET, | ||
| value = "/edamConcepts", | ||
| produces = {"application/json", "application/problem+json"}) | ||
| default ResponseEntity<EdamConceptsPageDto> listEdamConcepts( | ||
| @Parameter( | ||
| name = "edamConceptSearchQuery", | ||
| description = "The search query used to find EDAM concepts.") | ||
| @Valid | ||
| EdamConceptSearchQueryDto edamConceptSearchQuery) { | ||
| return getDelegate().listEdamConcepts(edamConceptSearchQuery); | ||
| } | ||
| } |
25 changes: 25 additions & 0 deletions
25
...va/org/sagebionetworks/openchallenges/challenge/service/api/EdamConceptApiController.java
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,25 @@ | ||
| package org.sagebionetworks.openchallenges.challenge.service.api; | ||
|
|
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| import java.util.Optional; | ||
| import javax.annotation.Generated; | ||
| import javax.validation.constraints.*; | ||
| import org.springframework.beans.factory.annotation.Autowired; | ||
| import org.springframework.stereotype.Controller; | ||
| import org.springframework.web.bind.annotation.RequestMapping; | ||
|
|
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| @Generated(value = "org.openapitools.codegen.languages.SpringCodegen") | ||
| @Controller | ||
| @RequestMapping("${openapi.openChallengesChallengeREST.base-path:/v1}") | ||
| public class EdamConceptApiController implements EdamConceptApi { | ||
|
|
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| private final EdamConceptApiDelegate delegate; | ||
|
|
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| public EdamConceptApiController(@Autowired(required = false) EdamConceptApiDelegate delegate) { | ||
| this.delegate = Optional.ofNullable(delegate).orElse(new EdamConceptApiDelegate() {}); | ||
| } | ||
|
|
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| @Override | ||
| public EdamConceptApiDelegate getDelegate() { | ||
| return delegate; | ||
| } | ||
| } |
52 changes: 52 additions & 0 deletions
52
...java/org/sagebionetworks/openchallenges/challenge/service/api/EdamConceptApiDelegate.java
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,52 @@ | ||
| package org.sagebionetworks.openchallenges.challenge.service.api; | ||
|
|
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| import java.util.Optional; | ||
| import javax.annotation.Generated; | ||
| import org.sagebionetworks.openchallenges.challenge.service.model.dto.EdamConceptSearchQueryDto; | ||
| import org.sagebionetworks.openchallenges.challenge.service.model.dto.EdamConceptsPageDto; | ||
| import org.springframework.http.HttpStatus; | ||
| import org.springframework.http.MediaType; | ||
| import org.springframework.http.ResponseEntity; | ||
| import org.springframework.web.context.request.NativeWebRequest; | ||
|
|
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| /** | ||
| * A delegate to be called by the {@link EdamConceptApiController}}. Implement this interface with a | ||
| * {@link org.springframework.stereotype.Service} annotated class. | ||
| */ | ||
| @Generated(value = "org.openapitools.codegen.languages.SpringCodegen") | ||
| public interface EdamConceptApiDelegate { | ||
|
|
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| default Optional<NativeWebRequest> getRequest() { | ||
| return Optional.empty(); | ||
| } | ||
|
|
||
| /** | ||
| * GET /edamConcepts : List EDAM concepts List EDAM concepts | ||
| * | ||
| * @param edamConceptSearchQuery The search query used to find EDAM concepts. (optional) | ||
| * @return Success (status code 200) or Invalid request (status code 400) or The request cannot be | ||
| * fulfilled due to an unexpected server error (status code 500) | ||
| * @see EdamConceptApi#listEdamConcepts | ||
| */ | ||
| default ResponseEntity<EdamConceptsPageDto> listEdamConcepts( | ||
| EdamConceptSearchQueryDto edamConceptSearchQuery) { | ||
| getRequest() | ||
| .ifPresent( | ||
| request -> { | ||
| for (MediaType mediaType : MediaType.parseMediaTypes(request.getHeader("Accept"))) { | ||
| if (mediaType.isCompatibleWith(MediaType.valueOf("application/json"))) { | ||
| String exampleString = "null"; | ||
| ApiUtil.setExampleResponse(request, "application/json", exampleString); | ||
| break; | ||
| } | ||
| if (mediaType.isCompatibleWith(MediaType.valueOf("application/problem+json"))) { | ||
| String exampleString = | ||
| "Custom MIME type example not yet supported: application/problem+json"; | ||
| ApiUtil.setExampleResponse(request, "application/problem+json", exampleString); | ||
| break; | ||
| } | ||
| } | ||
| }); | ||
| return new ResponseEntity<>(HttpStatus.NOT_IMPLEMENTED); | ||
| } | ||
| } |
22 changes: 22 additions & 0 deletions
22
.../org/sagebionetworks/openchallenges/challenge/service/api/EdamConceptApiDelegateImpl.java
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,22 @@ | ||
| package org.sagebionetworks.openchallenges.challenge.service.api; | ||
|
|
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| import org.sagebionetworks.openchallenges.challenge.service.model.dto.EdamConceptSearchQueryDto; | ||
| import org.sagebionetworks.openchallenges.challenge.service.model.dto.EdamConceptsPageDto; | ||
| import org.sagebionetworks.openchallenges.challenge.service.service.EdamConceptService; | ||
| import org.springframework.http.ResponseEntity; | ||
| import org.springframework.stereotype.Component; | ||
|
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| @Component | ||
| public class EdamConceptApiDelegateImpl implements EdamConceptApiDelegate { | ||
|
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| private final EdamConceptService edamConceptService; | ||
|
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| public EdamConceptApiDelegateImpl(EdamConceptService edamConceptService) { | ||
| this.edamConceptService = edamConceptService; | ||
| } | ||
|
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| @Override | ||
| public ResponseEntity<EdamConceptsPageDto> listEdamConcepts(EdamConceptSearchQueryDto query) { | ||
| return ResponseEntity.ok(edamConceptService.listEdamConcepts(query)); | ||
| } | ||
| } |
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