Merge pull request #5 from Sage-Bionetworks/dockerization

Dockerization
Sage-Bionetworks · Apr 8, 2023 · 72986a7 · 72986a7
2 parents f1dba3a + 4942894
commit 72986a7
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diff --git a/.github/workflows/R-CMD-check.yaml b/.github/workflows/R-CMD-check.yaml
@@ -21,10 +21,10 @@ jobs:
           - {os: macOS-latest,   r: 'devel'}
           - {os: macOS-latest,   r: 'release'}
           - {os: windows-latest, r: 'release'}
-          - {os: ubuntu-18.04,   r: 'release', rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
-          - {os: ubuntu-18.04,   r: '3.6',     rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
-          - {os: ubuntu-18.04,   r: '3.5',     rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
-          - {os: ubuntu-18.04,   r: '3.4',     rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
+          - {os: ubuntu-latest,   r: 'release', rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
+          - {os: ubuntu-latest,   r: '3.6',     rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
+          - {os: ubuntu-latest,   r: '3.5',     rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
+          - {os: ubuntu-latest,   r: '3.4',     rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
 
     env:
       R_REMOTES_NO_ERRORS_FROM_WARNINGS: true

diff --git a/Dockerfile b/Dockerfile
@@ -15,5 +15,5 @@ ENV SHINY_LOG_LEVEL=DEBUG
 RUN Rscript -e 'renv::restore(repos="https://packagemanager.rstudio.com/all/__linux__/jammy/latest"); renv::install("./")'
 
 # running that script, to pass a configuration env var to Shiny
-RUN chmod +x dccmonitor_startup.sh
+RUN chmod +x dccvalidator_1kD_startup.sh
 CMD ["./dccvalidator_1kD_startup.sh"]