use newer version of annotator.jar

Sage-Bionetworks · Jan 8, 2024 · 00f527e · 00f527e
1 parent cc081a1
commit 00f527e
Showing 1 changed file with 2 additions and 0 deletions.
diff --git a/genie/process_mutation.py b/genie/process_mutation.py
@@ -202,12 +202,14 @@ def process_mutation_workflow(
         "syn22053204",
         ifcollision="overwrite.local",
         downloadLocation=genie_config["genie_annotation_pkg"],
+        version=1, #TODO: This should pull from a config file in the future
     )
     # Genome Nexus Jar file
     syn.get(
         "syn22084320",
         ifcollision="overwrite.local",
         downloadLocation=genie_config["genie_annotation_pkg"],
+        version=13, #TODO: This should pull from a config file in the future
     )
 
     annotated_maf_path = annotate_mutation(