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Porting of MedNIST DDPM model-zoo from MONAI Generative #721

Merged
merged 17 commits into from
Feb 5, 2025
+1,168 −0
Merged

Porting of MedNIST DDPM model-zoo from MONAI Generative #721

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b856c15
Initial commit of mednist-ddpm
Jan 12, 2025
efa9d0a
mednist_ddpm commit. I have cleared the absolute paths to my personal…
Jan 13, 2025
1f3185d
Added unit test to test the CXR sampling, which works now. Modified v…
Jan 13, 2025
1d93cc0
Removal of absolute path
Jan 13, 2025
b62b4eb
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Jan 13, 2025
8a1b7da
Modify script > inv function by operator.lt in train.yaml.
Jan 14, 2025
86406e0
Merge branch 'mednist_ddpm' of https://github.com/virginiafdez/model-…
Jan 14, 2025
037642a
Remove unecessary imports from test.
Jan 21, 2025
fd195c4
Change infer.yaml to inference.yaml.
Jan 21, 2025
9d36b3b
Merge branch 'dev' into mednist_ddpm
ericspod Jan 24, 2025
dd92a8e
Move contents of common.yaml to train and inference.
Jan 28, 2025
31552e9
Bypass bundle_custom_data.py and change metadata.
Jan 28, 2025
7400ce1
Change schema.
Jan 28, 2025
a66c53d
Autofix
Jan 28, 2025
bb36f4e
Remove common.yaml and test.pt.
Feb 5, 2025
943361e
Merge branch 'dev' into mednist_ddpm
ericspod Feb 5, 2025
2073e40
Removing references to common.yaml
ericspod Feb 5, 2025
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Autofix
virginia committed Jan 28, 2025
commit a66c53de4958e7691851c01e5a4eba0f0921eaaf
2 changes: 1 addition & 1 deletion ci/bundle_custom_data.py
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Original file line number Diff line number Diff line change
@@ -42,7 +42,7 @@
"vista3d",
"maisi_ct_generative",
"vista2d",
"mednist_ddpm"
"mednist_ddpm",
]

# This list is used for our CI tests to determine whether a bundle needs to be tested after downloading